DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hrb98DE and Eif4h

DIOPT Version :10

Sequence 1:NP_524543.1 Gene:Hrb98DE / 43385 FlyBaseID:FBgn0001215 Length:365 Species:Drosophila melanogaster
Sequence 2:NP_001006958.1 Gene:Eif4h / 288599 RGDID:1359222 Length:248 Species:Rattus norvegicus


Alignment Length:137 Identity:41/137 - (29%)
Similarity:65/137 - (47%) Gaps:13/137 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly   125 FVGALKDDHDEQSIRDYFQHFGNIVDINIVIDKETGKKRGFAFVEFDDYDPVDKVVLQKQHQLNG 189
            :||.|..:..:..|...|:.. :|..:.:|.||:|.|.:||.:||||:.|.:.:.:......|..
  Rat    45 YVGNLPFNTVQGDIDAIFKDL-SIRSVRLVRDKDTDKFKGFCYVEFDEVDSLKEALTYDGALLGD 108

  Fly   190 KMVDVKKALPKQNDQQGGGGGRGGPGGRA-GGNRGNMGG--------GNYGNQNGGGNWNNGGNN 245
            :.:.|..|..::.|:.|.|..:|||..|. ||:|...||        ..|.:...||   .||:.
  Rat   109 RSLRVDIAEGRKQDKGGFGFRKGGPDDRGMGGSREPRGGWDSRDDFSSGYRDDFLGG---RGGSR 170

  Fly   246 WGNNRGG 252
            .|:.|.|
  Rat   171 PGDRRAG 177

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hrb98DENP_524543.1 RRM1_hnRNPA_like 32..109 CDD:409992
RRM_SF 123..195 CDD:473069 19/69 (28%)
Eif4hNP_001006958.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..41
RRM_eIF4H 37..120 CDD:409835 21/75 (28%)
SF-CC1 <40..>227 CDD:273721 41/137 (30%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 121..248 20/60 (33%)
Blue background indicates that the domain is not in the aligned region.

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