DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Hrb98DE and DAZAP1

DIOPT Version :9

Sequence 1:NP_524543.1 Gene:Hrb98DE / 43385 FlyBaseID:FBgn0001215 Length:365 Species:Drosophila melanogaster
Sequence 2:XP_011526206.1 Gene:DAZAP1 / 26528 HGNCID:2683 Length:550 Species:Homo sapiens


Alignment Length:421 Identity:113/421 - (26%)
Similarity:163/421 - (38%) Gaps:121/421 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 RKLFIGGLDYRTTDENLKAHFEKWGNIVDVVVMKDPRTKRSRGFGFITYSHSSMIDEAQKSRPHK 95
            ||||:||||:.||.|.|:::|.::|.:||.|:|||..|.:||||||:.:...:.:.....||||.
Human   153 RKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLASRPHT 217

  Fly    96 IDGRVVEPKRAVPR---QDIDSPNAG---------ATVKKLFVGALKDDHDEQSIRDYFQHFGNI 148
            :|||.::||...||   .:...|..|         :...|:|||.:..:..|..:|:||:.||.:
Human   218 LDGRNIDPKPCTPRGMQPERTRPKEGWQKGPRSDNSKSNKIFVGGIPHNCGETELREYFKKFGVV 282

  Fly   149 VDINIVIDKETGKKRGFAFVEFDDYDPVDKVVLQKQHQLNGKMVDVKKALPKQNDQQGGGGGRGG 213
            .::.::.|.|..:.|||.|:.|:|...||:.|....|.:.||.|:||:|.|:.:..|    ..|.
Human   283 TEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVEVKRAEPRDSKSQ----APGQ 343

  Fly   214 PGGRAGGNRGNMGGGNYGNQNGGGNWNNGGN---NWGNNRGGNDNW--GNNSFGGGG----GGG- 268
            ||....|:|        ...|....|  .|.   .|....|....|  ...:.||.|    |.| 
Human   344 PGASQWGSR--------VVPNAANGW--AGQPPPTWQQGYGPQGMWVPAGQAIGGYGPPPAGRGA 398

  Fly   269 ----------------GGY---GGGNNSWGNNNPWDNGNGG------------------------ 290
                            ||:   .|....:|....:..|.|.                        
Human   399 PPPPPPFTSYIVSTPPGGFPPPQGFPQGYGAPPQFSFGYGPPPPPPDQFAPPGVPPPPATPGAAP 463

  Fly   291 --------------------------GNFGGGGNNWNNGGNDFGGYQQ---NYGGGPQRGGGNFN 326
                                      |.:.|.|.:.:..|..|....|   :|||....|.|.  
Human   464 LAFPPPPSQAAPDMSKPPTAQPDFPYGQYAGYGQDLSGFGQGFSDPSQQPPSYGGPSVPGSGG-- 526

  Fly   327 NNRMQPYQGGGGFKAGGGNQGNYGGNNQGFN 357
                 |..||.||..|..:      |.|||:
Human   527 -----PPAGGSGFGRGQNH------NVQGFH 546

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hrb98DENP_524543.1 RRM1_hnRNPA_like 32..109 CDD:241022 35/76 (46%)
RRM_SF 123..195 CDD:302621 25/71 (35%)
DAZAP1XP_011526206.1 RRM <151..341 CDD:223796 70/191 (37%)
RRM1_DAZAP1 154..235 CDD:241018 37/80 (46%)
RRM2_DAZAP1 254..333 CDD:240773 28/78 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR48027
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
22.010

Return to query results.
Submit another query.