DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hrb98DE and LOC1274558

DIOPT Version :10

Sequence 1:NP_524543.1 Gene:Hrb98DE / 43385 FlyBaseID:FBgn0001215 Length:365 Species:Drosophila melanogaster
Sequence 2:XP_313699.4 Gene:LOC1274558 / 1274558 VectorBaseID:AGAMI1_004491 Length:390 Species:Anopheles gambiae


Alignment Length:391 Identity:77/391 - (19%)
Similarity:121/391 - (30%) Gaps:109/391 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 GNSNGHDDDFPQDSITEPEHMRKLFIGGLDYRTTDENLKAHFEKWGNIVDVVVMKDPRTKRSRGF 74
            |:.| ||......|      ||.:|:|.:.|..|:|.||..|.:.|.::.:.::.|..|.:.:|:
Mosquito     2 GDRN-HDPGIMDKS------MRSVFVGNIPYDATEEALKEIFCEVGLVLSMKLVYDRETGKPKGY 59

  Fly    75 GFITYSHSSMIDEAQKS--------RPHKIDGRVVEPKR------------AVPRQDIDSPNAGA 119
            ||..|........|.::        ||.::|....|..|            ..|..:..||....
Mosquito    60 GFCEYKDKETALSAMRNLNGYVFGGRPLRVDNACTEKSRMEMAALLHVNRAESPYGEHCSPQHAP 124

  Fly   120 TVKKLFVGALKDDHDEQSIRDYFQHFGNIVDINIVIDKETGKKRGFAFVEFDDYDPVD-KVVLQK 183
            .|....|.:|..:.    :.:.......:|..|                      |.: :.:|.:
Mosquito   125 EVITKHVSSLPPER----LHELMLQMKQLVQTN----------------------PFEARHMLVQ 163

  Fly   184 QHQLNGKMVDVKKALPKQNDQQGGGG----GRGGPGGRAGGNRGNMGGGNYGNQNGGGNWNNGGN 244
            ..||...::.| :.|.|..|......    .:..||         ......|||..||...|.|.
Mosquito   164 NPQLAYALLQV-QVLTKAIDPAAAYSFLYKSQSAPG---------FSEPFQGNQPQGGMQGNAGQ 218

  Fly   245 ---NWGNNRGGNDNWGNN---SFGGGGGGGGGYGGGNNSWGNNNPWDNGNGGGNFGGGGNNWNNG 303
               .:|.|.|..:::..|   ..|.....|.      |.:...|.:...|..|            
Mosquito   219 FMPQYGANNGNAESFRPNVDPRLGRQAASGA------NDYDPRNRFAASNQTG------------ 265

  Fly   304 GNDFGGYQQNYGGGPQRGGGNF-NNNRMQPYQGGGG-----FKAGGGNQGNYGGNNQGFNNGGNN 362
                    |.....||:....| .:.|.:|.....|     ..||.   .::|.|.....:||..
Mosquito   266 --------QRPAQPPQQNAAPFPTDPRQRPVDPRMGKDPRLMNAGA---AHFGSNANQLPSGGTG 319

  Fly   363 R 363
            |
Mosquito   320 R 320

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hrb98DENP_524543.1 RRM1_hnRNPA_like 32..109 CDD:409992 21/96 (22%)
RRM_SF 123..195 CDD:473069 8/72 (11%)
LOC1274558XP_313699.4 None

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