DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hrb98DE and LOC1270474

DIOPT Version :10

Sequence 1:NP_524543.1 Gene:Hrb98DE / 43385 FlyBaseID:FBgn0001215 Length:365 Species:Drosophila melanogaster
Sequence 2:XP_309173.5 Gene:LOC1270474 / 1270474 VectorBaseID:AGAMI1_007674 Length:163 Species:Anopheles gambiae


Alignment Length:92 Identity:32/92 - (34%)
Similarity:47/92 - (51%) Gaps:17/92 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   124 LFVGALKDDHDEQSIRDYFQHFGNIVDINIVIDKETGKKRGFAFVEFDDYDPVDKVVLQKQHQLN 188
            :|||.|..|..|..:...|..:|.||::|:|.||.|||.:||||:.::|    .:..:.....||
Mosquito    36 IFVGGLPYDLTEGDVLCVFSQYGEIVNVNLVRDKATGKSKGFAFICYED----QRSTVLAVDNLN 96

  Fly   189 G-KMVDVKKAL----------PKQNDQ 204
            | |:|.  |.|          ||:.|:
Mosquito    97 GIKLVG--KTLRVDHVQDYRPPKETDK 121

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hrb98DENP_524543.1 RRM1_hnRNPA_like 32..109 CDD:409992
RRM_SF 123..195 CDD:473069 27/71 (38%)
LOC1270474XP_309173.5 RRM_ist3_like 25..113 CDD:409845 29/82 (35%)
Blue background indicates that the domain is not in the aligned region.

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