DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment fkh and FKH2

DIOPT Version :9

Sequence 1:NP_001263038.1 Gene:fkh / 43383 FlyBaseID:FBgn0000659 Length:692 Species:Drosophila melanogaster
Sequence 2:NP_014331.3 Gene:FKH2 / 855656 SGDID:S000005012 Length:862 Species:Saccharomyces cerevisiae


Alignment Length:689 Identity:139/689 - (20%)
Similarity:242/689 - (35%) Gaps:217/689 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 SGGGGGGGGGGGGGPPPP---SNNNPNPTSNGGSMSPLARSAYTMNSMGLPVGGMSSVSPQ-AAA 87
            |||....|.|...||...   :|||.:...||          |           .:|::|. .|:
Yeast   242 SGGNAPFGSGANLGPSEQGIFNNNNNSKNKNG----------Y-----------FTSINPNYTAS 285

  Fly    88 TFSSSVLDSAAAVASMSASMSASMSASMNASMNGSMGAAAMNSMGGNCMTPSSMSYASMGSPLGN 152
            |.:|:.::..||                                                ||.| 
Yeast   286 TTTSNTINPQAA------------------------------------------------SPQG- 301

  Fly   153 MGGCMAMSAASMSAAGLSGTYGAMPPGSREMETGSPNSLGRSRVDKPTTYRRSYTHAKPPYSYIS 217
                   ...::.||....:|.:.....:.::..|..|...:|            :.|||:||.:
Yeast   302 -------PPNTIIAANFVDSYKSSNAYPQALDFTSDLSHDENR------------NVKPPHSYAT 347

  Fly   218 LITMAIQNNPTRMLTLSEIYQFIMDLFPFYRQNQQRWQNSIRHSLSFNDCFVKIPRTPDKPGKGS 282
            :||.||.::|..:::|::||::|...:.:||..:..|||||||:||.|..|.|:||.|::||||.
Yeast   348 MITQAILSSPEGVISLADIYKYISSNYAYYRFAKSGWQNSIRHNLSLNKAFEKVPRRPNEPGKGM 412

  Fly   283 FWTLHPDSGNMFENGCYLRRQKRFKDEKKEAIR---------QLHKSPSHSSLEATSPGKKDHED 338
            .|.:.......|.|        ::...|...||         |||.:..:|     .|.:.|:..
Yeast   413 KWRISESYQQEFLN--------KWNTGKVGKIRRGSSVARQLQLHMAKFNS-----LPMEMDYRL 464

  Fly   339 SHHMHHHHHSRLDHHQHHKEAGGASIAGVNVLSAAHSKDAEALAM-LHANAELCLSQQPQHVPTH 402
            |.:|......:|..|              |||..:::...|.... :.:...|..|||.| .|..
Yeast   465 SLNMAQPPKRQLQSH--------------NVLEPSNNNIIEGFVQHVPSKGNLPASQQSQ-PPVS 514

  Fly   403 HHHQHH----QLQQEELSAMMANRCHPSLITDYHSSMHPLK----QEPSG-----------YTPS 448
            |.:|..    |.|::|:....|:..:.::     :...|:|    |.|:.           |..|
Yeast   515 HQNQSQQPPPQEQRQEIQFTFADTQNRNI-----ALARPIKTPQLQAPNSNANLNQNNMKEYKES 574

  Fly   449 SHPFSINRLLPTESKADIKMYDMSQYAGYNALSPLTNSHA------------------------- 488
            .||.:|:            :..|::.:..|||...||:.|                         
Yeast   575 LHPPAIS------------ISQMNRQSPNNALVSFTNACANSKIINNISDSADKSTNNNGGTKMN 627

  Fly   489 --ALGQDSYYQSLGYHAPAGTTSLXHHQYPLAXGRAEQMLRSQQQQHLQQQHQQHQQQQQQHQLH 551
              |:...|..:: |...|..|||..:.......|.....|.:...: |.|.:..        .|.
Yeast   628 LPAISTSSLDEN-GNLEPTTTTSSGNSNSVPQTGTTTSSLAANSLR-LSQPYDT--------LLR 682

  Fly   552 QQQQQMQQSAQQLTSASNTPATSAKASGKAGSASASGSGSGSGS--GSG-----------SNYSQ 603
            ...:....:|.:..:.....|..|::...:.|.:.:.:|:.:.:  .||           ||..:
Yeast   683 SPTKAFHITAMEAYTPERGSANRARSPLHSNSNNTNNNGANNSNLQTSGMENKQTGLVLDSNVLK 747

  Fly   604 KLQQQHQQQQQQQAAAQQQHHQQQQQLLQELQEDSSNIT 642
            .::..:..::...:.::.|:.:....:...||..|:|.|
Yeast   748 SMESNNDNRRLTPSTSKSQNVKSSPGVWNLLQFSSTNNT 786

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
fkhNP_001263038.1 Forkhead_N <120..209 CDD:254796 9/88 (10%)
FH 210..298 CDD:214627 38/87 (44%)
FKH2NP_014331.3 COG5025 1..610 CDD:227358 112/501 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000010
OrthoInspector 1 1.000 - - otm46522
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.910

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