Protein Alignment fkh and Foxf1

DIOPT Version :9

• Sequence 1: NP_001263038.1
• Gene: fkh / 43383
• FlyBaseID: FBgn0000659
• Length: 692
• Species: Drosophila melanogaster
• Sequence 2: XP_006255786.2
• Gene: Foxf1 / 687536
• RGDID: 1584229
• Length: 447
• Species: Rattus norvegicus
• Alignment Length: 581
• Identity: 137/581 - (23%)
• Similarity: 187/581 - (32%)
• Gaps: 274/581 - (47%)

  Fly     6 AEPPPSSAPVSMASSGGGG-----------PPSGGGGGGGGGGGGGPPPPSNNNPNPTSNGGSMS 59
            |.|||.||..|...||||.           ||.|||.|||||.||
  Rat    48 APPPPGSAAQSSGGSGGGSSHPMSAPDKQQPPHGGGTGGGGGAGG-------------------- 92

  Fly    60 PLARSAYTMNSMGLPVGGMSSVSPQAAATFSSSVLDSAAAVASMSASMSASMSASMNASMNGSMG 124
                                            ..:|.|||                     |...
  Rat    93 --------------------------------QAMDPAAA---------------------GPTK 104

  Fly   125 AAAMNSMGGNCMTPSSMSYASMGSPLGNMGGCMAMSAASMSAAGLSGTYGAMPPGSREMETGSPN 189
            |...|:                                                |.|..|
  Rat   105 AKKTNA------------------------------------------------GVRRPE----- 116

  Fly   190 SLGRSRVDKPTTYRRSYTHAKPPYSYISLITMAIQNNPTRMLTLSEIYQFIMDLFPFYRQNQQRW 254
                                |||||||:||.||||::|::.|||||||||:...|||:|...|.|
  Rat   117 --------------------KPPYSYIALIVMAIQSSPSKRLTLSEIYQFLQARFPFFRGAYQGW 161

  Fly   255 QNSIRHSLSFNDCFVKIPRTPDKPGKGSFWTLHPDSGNMFENGCYLRRQKRFKDEKKEAIRQLHK 319
            :||:||:||.|:||:|:|:...:||||.:||:.|.|..|||.|.:.||.:.|: .|.:|::.::.
  Rat   162 KNSVRHNLSLNECFIKLPKGLGRPGKGHYWTIDPASEFMFEEGSFRRRPRGFR-RKCQALKPVYS 225

  Fly   320 ------------------------SPSHSSLEATSPGKKDH---------EDSHHMHH------H 345
                                    :|:..:||........|         ..||.:.|      |
  Rat   226 MVNGLGFNHLPDTYGFQGSGGLSCAPNSLALEGGLGMMNGHLTGNVDGMALPSHSVPHLPSNGGH 290

  Fly   346 HH------SRLDHHQHHKEAGGAS------IAGVNVLSAAHSKDA-----EALAMLHANAELCLS 393
            .:      |....:.||..:..||      ..||....|.:|..|     .|.|.|::.|.. :.
  Rat   291 SYMGGCGGSAAGEYPHHDSSVPASPLLPAGAGGVMEPHAVYSSSAAAWPPAASAALNSGASY-IK 354

  Fly   394 QQP------------QHVPTH-----HHHQHHQLQQEELSAMMANRCHPSLITDYHSSMHPLKQE 441
            |||            ..:.||     :.||:......||..          |..|||      |.
  Rat   355 QQPLSPCNPAANPLSGSISTHSLDQPYLHQNSHNGPAELQG----------IPRYHS------QS 403

  Fly   442 PSGYTPSSHPFSINRLLPTESKADIKMYDMSQYA-GYNALSPLTNSHAALGQDSYYQSLGY 501
            ||                        |.|..::. .:||::. ::.|...|...|:|.:.|
  Rat   404 PS------------------------MCDRKEFVFSFNAMAS-SSMHTTGGGSYYHQQVTY 439

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
fkh	NP_001263038.1	Forkhead_N	<120..209	CDD:254796	6/88 (7%)
		FH	210..298	CDD:214627	51/87 (59%)
Foxf1	XP_006255786.2	FH_FOXF1	118..216	CDD:410823	54/98 (55%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	1	1.000	-	-		FOG0000010
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	2	1.910