DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment fkh and jumu

DIOPT Version :9

Sequence 1:NP_001263038.1 Gene:fkh / 43383 FlyBaseID:FBgn0000659 Length:692 Species:Drosophila melanogaster
Sequence 2:NP_524302.1 Gene:jumu / 41265 FlyBaseID:FBgn0015396 Length:719 Species:Drosophila melanogaster


Alignment Length:559 Identity:126/559 - (22%)
Similarity:211/559 - (37%) Gaps:139/559 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    45 SNNNPNPTS-----NGGSMSPLARSAYTMNSMGLP--VGGMSSVSPQAAATFSSSVL------DS 96
            :.::|.|.|     .|...:.|..|....|::.|.  :||::..:..|......:.|      .|
  Fly   247 AQSSPVPNSLEELGKGKGSTLLNASVGATNTIKLAPGIGGLTFANSAAYQKLKQTSLVKSPGGIS 311

  Fly    97 AAAVASMSASMSASMSASMNASMNGSMGAAAMNS----MGGNCM--TPSSMSYASMGSPLGNMGG 155
            ..|.::|......|....:.||......|:|.||    |..|..  :|||:|.:|..|||||:..
  Fly   312 PGAGSNMGLKREDSNKRGLQASTTPKSIASAANSPHHQMQSNYSLGSPSSLSSSSASSPLGNVSN 376

  Fly   156 CMAMSAASMSAAGLSGTYGAMPPGSREME---TGSPNSLGRSRVDKPTTYRRSYTHAKPPYSYIS 217
            .:.::..:.|.||    .|.:.|..::::   .|||                   ..||.|||..
  Fly   377 LVNIANNNTSGAG----SGLVKPLQQKVKLPPVGSP-------------------FPKPAYSYSC 418

  Fly   218 LITMAIQNNPTRMLTLSEIYQFIMDLFPFYRQNQQRWQNSIRHSLSFNDCFVKI--PRTPDKPGK 280
            ||.:|::|:....|.:||||.|:...||::......|:||:||:||.|.||.||  |.|.....|
  Fly   419 LIALALKNSRAGSLPVSEIYSFLCQHFPYFENAPSGWKNSVRHNLSLNKCFEKIERPATNGNQRK 483

  Fly   281 GSFWTLHPDSGNMFENGCYLRRQKRFKDEKKEAIRQLHKSPSHSSLEATSPGKKDH--------- 336
            |..|.::||..|..:     ...:::..:...|||.....|.|  ||:...|:..|         
  Fly   484 GCRWAMNPDRINKMD-----EEVQKWSRKDPAAIRGAMVYPQH--LESLERGEMKHGSADSDVEL 541

  Fly   337 ------EDSHHMHHHH------HSRLDHHQHHKEAGGASIAGVNVLSAAHSKDAEALAMLHANAE 389
                  |:|..:..|.      .:.|...:..:|.|......:|        |.:|....|||  
  Fly   542 DSQSEIEESSDLEEHEFEDTMVDAMLVEEEDEEEDGDDDEQIIN--------DFDAEDERHAN-- 596

  Fly   390 LCLSQQPQHVPTHHHHQHHQLQQEELSAMMANRCHPSLITDYHSSMHPLKQEPSGYTPSSHPFSI 454
               ..|..::|.:|.....:....::.           :.|.:.:: .::.:..         |:
  Fly   597 ---GNQANNLPINHPLLGQKSNDFDIE-----------VGDLYDAI-DIEDDKE---------SV 637

  Fly   455 NRLLPTESK-ADIKMYDMSQYAGYNALSPLTNSHAALGQDSYYQSLGYHAPAGTTSLXHHQYPLA 518
            .|::..:.. .::...|::...|||....|..:..    |..| ::|   |||            
  Fly   638 RRIISNDQHIIELNPADLNATDGYNQQPALKRARV----DINY-AIG---PAG------------ 682

  Fly   519 XGRAEQMLRSQQQQHLQQQHQQHQQQQQQHQLHQQQQQM 557
                     ..:||:.|:...|...|.|||.....:::|
  Fly   683 ---------ELEQQYGQKVKVQQVIQPQQHPPTYNRRKM 712

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
fkhNP_001263038.1 Forkhead_N <120..209 CDD:254796 24/97 (25%)
FH 210..298 CDD:214627 37/89 (42%)
jumuNP_524302.1 Forkhead 411..499 CDD:278670 37/92 (40%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45445512
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.840

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