DRSC/TRiP Functional Genomics Resources

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Protein Alignment fkh and foxf2a

DIOPT Version :10

Sequence 1:NP_001263038.1 Gene:fkh / 43383 FlyBaseID:FBgn0000659 Length:692 Species:Drosophila melanogaster
Sequence 2:NP_001077284.1 Gene:foxf2a / 407681 ZFINID:ZDB-GENE-110407-5 Length:383 Species:Danio rerio


Alignment Length:368 Identity:102/368 - (27%)
Similarity:162/368 - (44%) Gaps:88/368 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   185 TGSPNSLGRSRVDKPTTYRRSYTHAKPPYSYISLITMAIQNNPTRMLTLSEIYQFIMDLFPFYRQ 249
            ||:......|.:.:|         .|||||||:.|.||||::||:.|||||||||:...|||:|.
Zfish    42 TGNKGKKSNSGMRRP---------EKPPYSYIAPIVMAIQSSPTKRLTLSEIYQFLQARFPFFRG 97

  Fly   250 NQQRWQNSIRHSLSFNDCFVKIPRTPDKPGKGSFWTLHPDSGNMFENGCYLRRQKRFKDEKKEAI 314
            :.|.|:||:||:||.|:||:|:|:...:||||.:||:.|.|..|||.|.:.||.:.|: .|.:|:
Zfish    98 SYQGWKNSVRHNLSLNECFIKLPKGLGRPGKGHYWTIDPGSEFMFEEGSFRRRPRGFR-RKCQAL 161

  Fly   315 RQLHKS-----------PSHSSLEATSPGKKDHEDSHHMH---------HHHHSRL--DHHQHH- 356
            :.:::.           |.:...::.|.....|.:|:::.         |..:..|  .||..| 
Zfish   162 KPMYRMMNGIGFGASMLPQNFDFQSPSASLACHANSYNLDMMSNAVQGVHAGYDGLGAGHHVSHM 226

  Fly   357 -KEAGGASIAGVNVLS-AAHSKDAEALAMLHANAELCLSQQPQHVPTHHHHQHHQLQQEELSAMM 419
             ...|...:....|.| ..:..|:              |..|.|.|            ..:|..:
Zfish   227 SPSTGSTYMTACQVASNGEYGPDS--------------SNSPLHSP------------PTMSGSL 265

  Fly   420 ANRCH-PSLITDYH---SSMHP-LKQEP--------SGYTPSSHPFSINR-LLPTESKADIKMYD 470
              .|| |......|   |.:.| :||:|        ||...|..|:|:.: .|....:....:..
Zfish   266 --ECHSPYGAASAHGASSGVSPYIKQQPLSSSSPTSSGLHSSMPPYSLEQSYLHHNGRDSADISG 328

  Fly   471 MSQYAGYNA-----------LSPLTNSHAALGQDSYYQSLGYH 502
            ||:|..:::           .:.:|:.|.:.....|:..|.:|
Zfish   329 MSRYQSHSSPVCDRKDFVLNFNGITSFHPSTSGSYYHHQLHHH 371

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
fkhNP_001263038.1 Forkhead_N <120..209 CDD:369872 4/23 (17%)
FH_dFKH 210..307 CDD:410815 54/96 (56%)
foxf2aNP_001077284.1 FH_FOXF1 59..157 CDD:410823 54/98 (55%)

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