DRSC/TRiP Functional Genomics Resources

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Protein Alignment fkh and foxq1b

DIOPT Version :10

Sequence 1:NP_001263038.1 Gene:fkh / 43383 FlyBaseID:FBgn0000659 Length:692 Species:Drosophila melanogaster
Sequence 2:NP_998072.2 Gene:foxq1b / 405843 ZFINID:ZDB-GENE-040426-2090 Length:304 Species:Danio rerio


Alignment Length:347 Identity:104/347 - (29%)
Similarity:152/347 - (43%) Gaps:80/347 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   129 NSMGGNCMTPSSMSYASMGSPLGNMGGCMAMSAASMSAAGLSGTYGAMPPGSREMETGSPNSLGR 193
            :.|..|..:|.|..     ..||:.|.|.|.|                 ||     .|:|...|:
Zfish    20 SDMDVNVASPLSTE-----EELGSDGDCSANS-----------------PG-----PGAPVPDGK 57

  Fly   194 SRVDKPTTYRRSYTHAKPPYSYISLITMAIQNNPTRMLTLSEIYQFIMDLFPFYRQNQQRWQNSI 258
            :   ||.|.|     .|||||||:||.|||:::.|..|||:||.:::|..|||:|.:...|:||:
Zfish    58 A---KPYTRR-----PKPPYSYIALIAMAIRDSNTGRLTLAEINEYLMKKFPFFRGSYTGWRNSV 114

  Fly   259 RHSLSFNDCFVKIPRTPDKP-GKGSFWTLHPDSGNMFENGCYLRRQKRFKDEKKEAIRQLHKSPS 322
            ||:||.||||:|:.|.|.:| ||.::|.|:|.|...|.:|.:.||:||.   .|:.:.       
Zfish   115 RHNLSLNDCFLKVLRDPSRPWGKDNYWMLNPHSEYTFADGVFRRRRKRI---SKKILG------- 169

  Fly   323 HSSLEATSPGKKDHEDSHHMHHHHHSRLDHHQHHKEAGGASIAGVNVLSAAHSKDAEAL-AMLHA 386
                .|.||.:...:|         |||...........:|.|..::||....:..::. .....
Zfish   170 ----SAESPERVPADD---------SRLPARDESVSKFSSSFAIDSILSKPFMRREQSTDDTCFG 221

  Fly   387 NAELCLSQQPQHVPT---HHHHQHHQLQQEELSAMMANRCHP------SLITDYHSSM------H 436
            ...|.||..|..:|.   :......|:..|..:.....||:.      |.:.|..||:      |
Zfish   222 TTRLMLSAAPHFLPVAMGYPPQSRFQVSSEVSNVFPIYRCNTADISNISRMADIQSSLPGLAHSH 286

  Fly   437 PLKQEPSGYTPSSHPFSINRLL 458
            ...|| :|:    |||.|:.||
Zfish   287 TTLQE-AGF----HPFRIDSLL 303

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
fkhNP_001263038.1 Forkhead_N <120..209 CDD:369872 19/79 (24%)
FH_dFKH 210..307 CDD:410815 50/97 (52%)
foxq1bNP_998072.2 FH_FOXQ1-like 66..144 CDD:410808 41/77 (53%)

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