DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment fkh and croc

DIOPT Version :9

Sequence 1:NP_001263038.1 Gene:fkh / 43383 FlyBaseID:FBgn0000659 Length:692 Species:Drosophila melanogaster
Sequence 2:NP_524202.1 Gene:croc / 40374 FlyBaseID:FBgn0014143 Length:508 Species:Drosophila melanogaster


Alignment Length:598 Identity:159/598 - (26%)
Similarity:224/598 - (37%) Gaps:202/598 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   143 YASMGSPLGNMGGCMAMSAASMSAAGLSGTYGAMPPGSREMETGSPNSLGRSRVDKPTTYRRSYT 207
            ||...:..|:.....|.|:||.:||    .:.|....||...:.|...||....:|..       
  Fly    15 YAQTAAGYGSASAVAAASSASAAAA----AHYAYDQYSRYPYSASAYGLGAPHQNKEI------- 68

  Fly   208 HAKPPYSYISLITMAIQNNPTRMLTLSEIYQFIMDLFPFYRQNQQRWQNSIRHSLSFNDCFVKIP 272
             .|||||||:||.|||||...:.:||:.|||:||:.||:||.|:|.|||||||:||.|:||||:.
  Fly    69 -VKPPYSYIALIAMAIQNAADKKVTLNGIYQYIMERFPYYRDNKQGWQNSIRHNLSLNECFVKVA 132

  Fly   273 RTPDKPGKGSFWTLHPDSGNMFENGCYLRRQKRFKD-----EKKEAIRQLHKSPSHSSLEATSPG 332
            |...||||||:|||.|||.|||:||.:|||::|||.     ||:|||::  ::..:..|....|.
  Fly   133 RDDKKPGKGSYWTLDPDSYNMFDNGSFLRRRRRFKKKDVMREKEEAIKR--QAMMNEKLAEMKPL 195

  Fly   333 K---KDHEDSHHMHHHHHSRLDHHQHHKEAGGASIAGVNVLSAAHSKDAEALAMLHANAELCLSQ 394
            |   ....::.||..|                          |||.| .|.|..|.     ||| 
  Fly   196 KLMTNGILEAKHMAAH--------------------------AAHFK-KEPLMDLG-----CLS- 227

  Fly   395 QPQHVPTHHHHQHHQLQQEELSAMMANRCHPSLITDYHSSMHPLKQEPSGYTPSSHP-FSINRLL 458
                            .:|...|.|.|.||.||....|.:...::          || |:::.|:
  Fly   228 ----------------GKEVSHAAMLNSCHDSLAQMNHLAGGGVE----------HPGFTVDSLM 266

  Fly   459 PTESKADIKMYDMSQYAGYNALSPLTNSHAALGQDSYYQSLGYHAPAGTTSLXHHQYP------- 516
                               |..:|                          .: |..||       
  Fly   267 -------------------NVYNP--------------------------RIHHSAYPYHLNEDN 286

  Fly   517 LAXGRAEQMLRSQQQQHLQQQHQQHQQQQQQHQLH--------QQQQQMQQSAQQLTSASN---- 569
            || ..:.||   ....|....|  |.||.|:|..|        .|....|.|....|:.|.    
  Fly   287 LATVASSQM---HHVHHAAAAH--HAQQLQRHVAHVAHPLTPGGQGAGGQSSGHSPTTISTPHGP 346

  Fly   570 ------TPATSAKA----SGKAGSAS------------------ASGSGSGSGSGSGSN------ 600
                  ||.|....    :|:.|:.:                  .:|.|.|.|.|.||:      
  Fly   347 AHGGWYTPETPPSEPVPHNGQQGTPTHPGHNNNNSSSVLNHNGVGNGGGGGGGGGGGSSSVLTSS 411

  Fly   601 ------YSQKLQQQHQQQQQQQAAAQQQHHQQQQQLLQELQEDSSNITSDLSEEQLQQHQAAQQQ 659
                  :...:.:|:|..|....:.           ...||..|...::.::........|....
  Fly   412 PTSALGFRDMIFEQNQSCQLDTGSP-----------TGSLQSASPPASASVAAASAAAAAAVISS 465

  Fly   660 LYNNYQQYAAAAG 672
            .::::..:||.:|
  Fly   466 HHHHHHHHAALSG 478

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
fkhNP_001263038.1 Forkhead_N <120..209 CDD:254796 16/65 (25%)
FH 210..298 CDD:214627 58/87 (67%)
crocNP_524202.1 Forkhead 70..156 CDD:278670 57/85 (67%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45445515
Domainoid 1 1.000 104 1.000 Domainoid score I1720
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000010
OrthoInspector 1 1.000 - - otm46522
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11829
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
65.940

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