DRSC/TRiP Functional Genomics Resources

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Protein Alignment fkh and foxa2

DIOPT Version :9

Sequence 1:NP_001263038.1 Gene:fkh / 43383 FlyBaseID:FBgn0000659 Length:692 Species:Drosophila melanogaster
Sequence 2:NP_989423.1 Gene:foxa2 / 395063 XenbaseID:XB-GENE-480476 Length:434 Species:Xenopus tropicalis


Alignment Length:471 Identity:187/471 - (39%)
Similarity:255/471 - (54%) Gaps:115/471 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    95 DSAAAVASMSASMS-------ASMSA-SMNASMN-GSMGAAAMN-----SMGGNCMTPSSMSYAS 145
            ::.::|.:|:|.:|       .|||| |.:|:|. |||..:.:|     |:.|  |:|.:.:...
 Frog    23 EAYSSVGNMNAGLSMNPMNTYMSMSAMSTSANMTAGSMNMSYVNTGMSPSLTG--MSPGTGAMTG 85

  Fly   146 MGSPLGNMGGCMAMSAASMSAAGLSGTYGAMPPGSREMETGSP----NSLGRSRVDKPTTYRRSY 206
            ||:.:.:|...::.|.:.|||...|  ..|:.|.: .|.:.||    :::.|||  .|.||||||
 Frog    86 MGTGVASMASHLSPSMSPMSAQATS--MNALAPYT-NMNSMSPIYGQSNINRSR--DPKTYRRSY 145

  Fly   207 THAKPPYSYISLITMAIQNNPTRMLTLSEIYQFIMDLFPFYRQNQQRWQNSIRHSLSFNDCFVKI 271
            ||||||||||||||||||.:|.:|||||||||:|||||||||||||||||||||||||||||:|:
 Frog   146 THAKPPYSYISLITMAIQQSPNKMLTLSEIYQWIMDLFPFYRQNQQRWQNSIRHSLSFNDCFLKV 210

  Fly   272 PRTPDKPGKGSFWTLHPDSGNMFENGCYLRRQKRFKDEKKEAIRQ-----LHK------SPSHSS 325
            ||:|||||||||||||||||||||||||||||||||.|||.::|:     |.:      |.::||
 Frog   211 PRSPDKPGKGSFWTLHPDSGNMFENGCYLRRQKRFKCEKKPSLREGGGKKLSEGSSSVGSAANSS 275

  Fly   326 LEATSPGKKDHEDSHHMHHHHHSRLDHHQHHKEAGGASIAGVNVLSAAHSKDAEALAMLHANAEL 390
            .|::...:..|..|........|.:|                       .|.::.|:..||.:. 
 Frog   276 SESSVGNESPHSSSSPCQEQKRSLVD-----------------------MKSSQGLSPDHAASP- 316

  Fly   391 CLSQQPQHVPTHHHHQHHQLQQEELSAMMANRCHPSLITDYHSSMHPLKQEPSGYTPSSHPFSIN 455
              :.|.||:.:.||            :::::.....|..::|.|.             :||||||
 Frog   317 --ASQAQHLLSQHH------------SVLSHEAQSHLKPEHHYSF-------------NHPFSIN 354

  Fly   456 RLLPTES--------------KADIKMYD-MSQYAGYN-------ALSPLTN-----SHAALGQD 493
            .|:.:|.              |.|:|.|: :..|:||.       |:|.:||     |.......
 Frog   355 NLMSSEQQHHHHHHHNHHHHHKMDLKAYEQVMHYSGYGSPMTGSLAMSTVTNKSGLESSPISSDT 419

  Fly   494 SYYQSLGYHAPAGTTS 509
            ||||.: |..|...:|
 Frog   420 SYYQGV-YSRPIMNSS 434

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
fkhNP_001263038.1 Forkhead_N <120..209 CDD:254796 32/98 (33%)
FH 210..298 CDD:214627 79/87 (91%)
foxa2NP_989423.1 Forkhead_N 17..148 CDD:369872 43/131 (33%)
FH 149..237 CDD:214627 79/87 (91%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 249..339 21/127 (17%)
HNF_C 349..423 CDD:370449 22/73 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 175 1.000 Domainoid score I3596
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 266 1.000 Inparanoid score I2969
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1181467at2759
OrthoFinder 1 1.000 - - FOG0000010
OrthoInspector 1 1.000 - - otm48067
Panther 1 1.100 - - O PTHR11829
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4570
SonicParanoid 1 1.000 - - X1772
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1010.100

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