DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment fkh and FoxK

DIOPT Version :9

Sequence 1:NP_001263038.1 Gene:fkh / 43383 FlyBaseID:FBgn0000659 Length:692 Species:Drosophila melanogaster
Sequence 2:NP_001261701.1 Gene:FoxK / 39252 FlyBaseID:FBgn0036134 Length:760 Species:Drosophila melanogaster


Alignment Length:698 Identity:162/698 - (23%)
Similarity:222/698 - (31%) Gaps:284/698 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 SSAPVSMASSGGGGPPSGGGGGGGGGGGGGP---------------------------------P 42
            |..|.:.:.:..|..||...|||||..|||.                                 .
  Fly   253 SYVPATSSDAIDGHSPSLVVGGGGGVAGGGAHVIITPLPRDELHQQQLHHHQQQPHLQQQQHPHH 317

  Fly    43 PPSNNNP--------NPTSNGGSMSPLARSAYTMNSMGLPVGGMSSVSPQAAATFSSSVLDSAAA 99
            ||:::.|        .|..:....:|.....:|.........|...|:|.|.|.......|....
  Fly   318 PPAHHLPLQQQQQQQQPAHHPLPHTPHHPLHHTALHQQQQRSGSIVVAPPAGAAAHLIAGDGPGI 382

  Fly   100 VASMSASMSASMSASMNASMNGSMGAAAMNSMGGNCMTPSSMSYASMGSPLGNMGGCMAMSAASM 164
            .:.:..|:......|...|..|::.||      .:|  |:|.....:.:...|.           
  Fly   383 YSPLKISIPKKEQKSPYLSPTGTISAA------NSC--PASPRQGFIQNQPNNY----------- 428

  Fly   165 SAAGLSGTYGAMPPGSREMETGSPNSLGRSRVDKPTTYRRSYTH-AKPPYSYISLITMAIQNNPT 228
                  ..||              |:..:.....|:|  .||.| .||||||..||..||...|.
  Fly   429 ------NNYG--------------NNNTQDLFQTPST--ASYNHNEKPPYSYAQLIVQAISAAPD 471

  Fly   229 RMLTLSEIYQFIMDLFPFYRQNQQR-WQNSIRHSLSFNDCFVKIPRTPDKPGKGSFWTLHPDSGN 292
            :.||||.||.||:..:|:||:...: |||||||:||.|..|:|:.|:.|:|||||||.:.||||.
  Fly   472 KQLTLSGIYSFIVKHYPYYRKETNKGWQNSIRHNLSLNRYFIKVARSQDEPGKGSFWRIDPDSGA 536

  Fly   293 MFENGCYLRRQKRFKDEKKEAIRQLHKSPSHSSLEATSPGKKDHEDSHHMHHHHHSRLDHHQHHK 357
            ...:..|.:|::|                                                    
  Fly   537 KLIDHSYKKRRQR---------------------------------------------------- 549

  Fly   358 EAGGASIAGVNVLSAAHSKDAEALAMLHANAELCLSQQPQHVPTHHHHQHHQLQQEELSAMMANR 422
                                               |.|                           
  Fly   550 -----------------------------------SSQ--------------------------- 552

  Fly   423 CHPSLITDYHSSMHPLKQEPSGYTPSSHPFSINRLLPTESKADIKMYDMSQYAGYNALSPLTNSH 487
                                 |:.|   |:.:.|..|...         |........|||    
  Fly   553 ---------------------GFRP---PYGMPRSAPVSP---------SHMDNSRESSPL---- 580

  Fly   488 AALGQDSYYQSLGYHAPAGTTSLXHHQYPLAXGRA--EQMLRSQQQQHLQQQHQQHQQQQQQHQL 550
                ||...||    || |:..:...|      ||  .:::.:.|..| |||.||.||||||...
  Fly   581 ----QDIVLQS----AP-GSPGMSLEQ------RAADPEIIYNSQNAH-QQQQQQQQQQQQQTLS 629

  Fly   551 HQQQQQMQQSAQQLTSASN---TPATSAKASGKAGSASASGSGSGSGSGS----------GSNYS 602
            :...|....|...:|:.|:   ||.|..:.|      :|||.|.|.|.|:          |...|
  Fly   630 NNSNQYSSGSPYYVTNQSSGVATPQTHVEGS------AASGGGGGGGVGALLALKRNHVMGGGAS 688

  Fly   603 QKLQQQHQQQQQQQAAAQQQHHQQQQQLLQELQED-SSNITSDLSEEQ 649
            |      ....||||.|||||   .:.:.:||..| |.:|  :.|||:
  Fly   689 Q------HTLHQQQAVAQQQH---SEIIYEELPTDYSGHI--EASEEE 725

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
fkhNP_001263038.1 Forkhead_N <120..209 CDD:254796 15/89 (17%)
FH 210..298 CDD:214627 47/88 (53%)
FoxKNP_001261701.1 FHA <170..253 CDD:238017 162/698 (23%)
Forkhead 453..540 CDD:278670 47/86 (55%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45445516
Domainoid 1 1.000 104 1.000 Domainoid score I1720
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000010
OrthoInspector 1 1.000 - - otm46522
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
54.840

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