DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment fkh and fkh2

DIOPT Version :9

Sequence 1:NP_001263038.1 Gene:fkh / 43383 FlyBaseID:FBgn0000659 Length:692 Species:Drosophila melanogaster
Sequence 2:NP_596764.1 Gene:fkh2 / 2539703 PomBaseID:SPBC16G5.15c Length:642 Species:Schizosaccharomyces pombe


Alignment Length:542 Identity:113/542 - (20%)
Similarity:187/542 - (34%) Gaps:129/542 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   160 SAASMSAAGLSGTYGAMPPGSREMETGS---PNSLGRSRVDKPTTYRRSY-THAKPPYSYISLIT 220
            |.:.:..|||...: .:|..:.:.:|..   .....:|.:.........| .:.||||||..:|.
pombe   170 SGSILEVAGLQMMF-VLPNAAEQKQTDESTIKEDAIKSEISAAVNDAAEYGDNKKPPYSYSVMIA 233

  Fly   221 MAIQNNPTRMLTLSEIYQFIMDLFPFYRQNQQRWQNSIRHSLSFNDCFVKIPRTPDKPGKGSFWT 285
            .||.::...|:|||.||.:|...:|:||..:..|||||||:||.|..|.|:||...:.|||..|:
pombe   234 QAILSSSECMMTLSNIYSWISTHYPYYRTTKSGWQNSIRHNLSLNKAFRKVPRKSGEQGKGMKWS 298

  Fly   286 LHPDSGNMFENGCYLRRQKRFKD-------EKKEAIRQLHKSPS----------HSSLEATSPGK 333
            :.|:....|........:||...       :|:|.      |||          .:|:.|..|..
pombe   299 IVPEFREEFIAKTRKTPRKRSPSSPVPLLAKKREG------SPSLPIPILPKMKDTSIPAAEPAS 357

  Fly   334 -----KDHEDSHHMHHHHHSRLDHHQHHKEAGGASIAGVNVLSAAHSKDAEALAMLHANAELCLS 393
                 :|...|               ..|:.|..|.|.    ::|..|..|..            
pombe   358 STTSARDQTPS---------------TPKDVGSPSTAE----TSAEEKQMETY------------ 391

  Fly   394 QQPQH------VPTHHHHQHHQLQQEELSAMMANRCHPSLI-TDYHSSMHPLKQEPSGYTPSSHP 451
            :.|.|      :.||.:         .|.|..|::...:.. :...||.:|        |.|..|
pombe   392 KTPTHAALSDIISTHDY---------ALDANSASQTKKAAFGSPIGSSTYP--------TSSPAP 439

  Fly   452 FSINRLLPTESKADIKMYDMSQYAGYNALSPL---TNSHAALGQDSYYQSLGYHAPAGTTSLXHH 513
            |.....:|..       :|..|...|:.:||.   .|||.      .|..:...:|.......|.
pombe   440 FWKYVAVPNP-------HDWPQVGSYDTISPYRNPVNSHL------IYSQIQQSSPKKIDEQLHD 491

  Fly   514 QYPLAXGRAEQMLRSQQQQHLQQQHQQHQQQQQQHQLHQQQQQMQQSAQQLTSASNTPATSAKAS 578
            ...:......:.:.|.::..:.:...........:..:...:....:.|::   |..|..||...
pombe   492 LQGVDLVNGFEGISSWRESMVNKLRSSVSDSPTMNLANSNSKSSPVAVQRV---STLPQASANKQ 553

  Fly   579 GKAGSASASGSGSGSGSGSGSNY--------SQKLQQQHQ--------QQQQQQAAAQQQHHQQQ 627
            .|...:..|.|.:.......:|.        |..:::|:.        .|.:..:..|..:....
pombe   554 AKEMESKMSNSPTQKSKTEENNQAVRAILDASATMEKQYDLHRLPTPTSQTESASVPQIANPPNS 618

  Fly   628 QQLLQE------LQEDSSNITS 643
            |.|::|      :|...||:.|
pombe   619 QNLVKEKSPQQYIQVPQSNVKS 640

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
fkhNP_001263038.1 Forkhead_N <120..209 CDD:254796 8/52 (15%)
FH 210..298 CDD:214627 39/87 (45%)
fkh2NP_596764.1 COG5025 6..622 CDD:227358 107/522 (20%)
FHA 81..185 CDD:238017 4/15 (27%)
Forkhead 223..308 CDD:278670 38/84 (45%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 104 1.000 Domainoid score I1720
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000010
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.910

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