DRSC/TRiP Functional Genomics Resources

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Protein Alignment fkh and Foxd4

DIOPT Version :10

Sequence 1:NP_001263038.1 Gene:fkh / 43383 FlyBaseID:FBgn0000659 Length:692 Species:Drosophila melanogaster
Sequence 2:XP_001055972.2 Gene:Foxd4 / 252886 RGDID:621716 Length:432 Species:Rattus norvegicus


Alignment Length:143 Identity:74/143 - (51%)
Similarity:89/143 - (62%) Gaps:13/143 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly   178 PGSREMETGS-------PNSLG------RSRVDKPTTYRRSYTHAKPPYSYISLITMAIQNNPTR 229
            ||:|.:...|       .||.|      ..|....||.......||||||||:||||||..:|.:
  Rat    58 PGARTLARRSAWDCGDLSNSSGFLRKFRAPRTRATTTTADGPQPAKPPYSYIALITMAILQSPHK 122

  Fly   230 MLTLSEIYQFIMDLFPFYRQNQQRWQNSIRHSLSFNDCFVKIPRTPDKPGKGSFWTLHPDSGNMF 294
            .||||.|..||...||:||:....|||||||:||.|||||||||.|..||||::|:|.|.|.:||
  Rat   123 RLTLSGICAFISGRFPYYRRKFPAWQNSIRHNLSLNDCFVKIPREPGHPGKGNYWSLDPASQDMF 187

  Fly   295 ENGCYLRRQKRFK 307
            :||.:|||:||||
  Rat   188 DNGSFLRRRKRFK 200

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
fkhNP_001263038.1 Forkhead_N <120..209 CDD:369872 10/43 (23%)
FH_dFKH 210..307 CDD:410815 61/96 (64%)
Foxd4XP_001055972.2 FH_FOXD4-like 103..198 CDD:410822 59/94 (63%)
flhF 213..>297 CDD:235904
Blue background indicates that the domain is not in the aligned region.

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