DRSC/TRiP Functional Genomics Resources

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Protein Alignment fkh and FOXC2

DIOPT Version :9

Sequence 1:NP_001263038.1 Gene:fkh / 43383 FlyBaseID:FBgn0000659 Length:692 Species:Drosophila melanogaster
Sequence 2:NP_005242.1 Gene:FOXC2 / 2303 HGNCID:3801 Length:501 Species:Homo sapiens


Alignment Length:538 Identity:158/538 - (29%)
Similarity:218/538 - (40%) Gaps:128/538 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   142 SYASMGSPLGNMGGCMAMSAASMSAAGLSGTYGAMPPGSREMETGSPNSLGRSRVDKPTTYRRSY 206
            ||..|.||:|...|     .....:||:..:|...    ...:..:|..|               
Human    30 SYGGMASPMGVYSG-----HPEQYSAGMGRSYAPY----HHHQPAAPKDL--------------- 70

  Fly   207 THAKPPYSYISLITMAIQNNPTRMLTLSEIYQFIMDLFPFYRQNQQRWQNSIRHSLSFNDCFVKI 271
              .|||||||:||||||||.|.:.:||:.|||||||.|||||:|:|.|||||||:||.|:||||:
Human    71 --VKPPYSYIALITMAIQNAPEKKITLNGIYQFIMDRFPFYRENKQGWQNSIRHNLSLNECFVKV 133

  Fly   272 PRTPDKPGKGSFWTLHPDSGNMFENGCYLRRQKRFKDEKKEAIRQLHKSPSHSSLEATSPGKKDH 336
            ||...||||||:|||.|||.||||||.:|||::|||  ||:.                   .|:.
Human   134 PRDDKKPGKGSYWTLDPDSYNMFENGSFLRRRRRFK--KKDV-------------------SKEK 177

  Fly   337 EDSHHMHHHHHSRLDHHQHHKEAGGASIAGVNVLSAAHSKDA--EALAMLHANAELCLSQQPQHV 399
            |:..|:              ||...|:..|..  :..|..||  ||...:...:|......|  |
Human   178 EERAHL--------------KEPPPAASKGAP--ATPHLADAPKEAEKKVVIKSEAASPALP--V 224

  Fly   400 PTHHHHQHHQLQQEELSAMMANRCHPSLITDYHSSMHPLKQEPSGYTPSSHPFSINRLLPTESKA 464
            .|         :.|.||...|.:..|      .|:.......|.|..|..|..:.|. ||..|..
Human   225 IT---------KVETLSPESALQGSP------RSAASTPAGSPDGSLPEHHAAAPNG-LPGFSVE 273

  Fly   465 DIKMY-------DMSQYAGYNAL--SPLTNSHAALGQDSYYQSLGYHAPAGTTSLXHHQYPLAXG 520
            :|...       ::|..||...|  .||...:||....:|.|.......||           |.|
Human   274 NIMTLRTSPPGGELSPGAGRAGLVVPPLALPYAAAPPAAYGQPCAQGLEAG-----------AAG 327

  Fly   521 RAEQMLRSQQQQHLQQQHQQHQQQQQQHQLHQQQQQMQQSAQQLTSASNTPATSAK-ASGKAGSA 584
            ..:..:|: ...:...:...|.         .....:.::.....|...:|.::.. |:|:.|:.
Human   328 GYQCSMRA-MSLYTGAERPAHM---------CVPPALDEALSDHPSGPTSPLSALNLAAGQEGAL 382

  Fly   585 SASGSGSGSGSGSGSNYSQKLQQQHQQQQQQQAAAQQQHHQQQQQLLQELQEDSSNITSDLSEEQ 649
            :|:|           ::.|.....|.|......|.|.|...|......:......|.:.||:  .
Human   383 AATG-----------HHHQHHGHHHPQAPPPPPAPQPQPTPQPGAAAAQAASWYLNHSGDLN--H 434

  Fly   650 LQQHQ-AAQQQLYNNYQQ 666
            |..|. |||||.:.|.::
Human   435 LPGHTFAAQQQTFPNVRE 452

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
fkhNP_001263038.1 Forkhead_N <120..209 CDD:254796 12/66 (18%)
FH 210..298 CDD:214627 65/87 (75%)
FOXC2NP_005242.1 FH 72..160 CDD:214627 65/87 (75%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 167..208 16/77 (21%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 232..268 9/42 (21%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 383..420 9/47 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000010
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.910

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