DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment fkh and fkh-2

DIOPT Version :10

Sequence 1:NP_001263038.1 Gene:fkh / 43383 FlyBaseID:FBgn0000659 Length:692 Species:Drosophila melanogaster
Sequence 2:NP_508644.1 Gene:fkh-2 / 180663 WormBaseID:WBGene00001434 Length:270 Species:Caenorhabditis elegans


Alignment Length:143 Identity:57/143 - (39%)
Similarity:81/143 - (56%) Gaps:20/143 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly   178 PGSREMETGSPNSLGRSRVDKPTTYRRSYTHAKPPYSYISLITMAIQNNPTRMLTLSEIYQFIMD 242
            |.|...|..:|:|                .:.|||:||.:||.|||:::|.:.|||:.||::|:.
 Worm    77 PSSSNSEEKTPSS----------------PNDKPPFSYNALIMMAIKDSPEKRLTLAGIYEYIVT 125

  Fly   243 LFPFYRQNQQRWQNSIRHSLSFNDCFVKIPRTPDKPGKGSFWTLHPDS-GNMFENGC---YLRRQ 303
            .:||||.|:|.|||||||:||.|.||||:||..|.||||::|.|...: ..:|..|.   ..||.
 Worm   126 NYPFYRDNKQGWQNSIRHNLSLNKCFVKVPRNFDDPGKGNYWMLDATAEDEVFIGGATGKLRRRP 190

  Fly   304 KRFKDEKKEAIRQ 316
            ......:.:|.:|
 Worm   191 SSLSRARMDAYKQ 203

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
fkhNP_001263038.1 Forkhead_N <120..209 CDD:369872 5/30 (17%)
FH_dFKH 210..307 CDD:410815 50/100 (50%)
fkh-2NP_508644.1 FH_FOXG 93..171 CDD:410795 46/77 (60%)

Return to query results.
Submit another query.