DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment fkh and Foxg1

DIOPT Version :9

Sequence 1:NP_001263038.1 Gene:fkh / 43383 FlyBaseID:FBgn0000659 Length:692 Species:Drosophila melanogaster
Sequence 2:NP_001153584.1 Gene:Foxg1 / 15228 MGIID:1347464 Length:481 Species:Mus musculus


Alignment Length:542 Identity:145/542 - (26%)
Similarity:192/542 - (35%) Gaps:179/542 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 PPSSAPVSMASSGGGGPPSGGGGGGGGGGGGGPPPPSNNNPNPTSNGGSMSPLARSAYTMNSMGL 73
            ||..||         .||              ||||......|..  ....|.||        |.
Mouse    57 PPPPAP---------QPP--------------PPPPQQQQQQPPP--APQPPQAR--------GA 88

  Fly    74 PVGGMSSVSPQAAATFSSSVLDSAAAVASMSASMSASMSASMNASMNGSMGAAAMNSMGGNCMTP 138
            |... ....||......|:.||.|.|.|                       ..|....||.   |
Mouse    89 PAAD-DDKGPQPLLLPPSTALDGAKADA-----------------------LGAKGEPGGG---P 126

  Fly   139 SSMSYASMGSPLGNMGGCMAMSAASMSAAGLSGTYGAMPPGSREMETGSPNSLGRSRVDKPTTYR 203
            :.:  |.:|......|               :|..|....|:.|   |..:..|....||     
Mouse   127 AEL--APVGPDEKEKG---------------AGAGGEEKKGAGE---GGKDGEGGKEGDK----- 166

  Fly   204 RSYTHAKPPYSYISLITMAIQNNPTRMLTLSEIYQFIMDLFPFYRQNQQRWQNSIRHSLSFNDCF 268
            ::..:.|||:||.:||.|||:.:|.:.|||:.||:|||..||:||:|:|.|||||||:||.|.||
Mouse   167 KNGKYEKPPFSYNALIMMAIRQSPEKRLTLNGIYEFIMKNFPYYRENKQGWQNSIRHNLSLNKCF 231

  Fly   269 VKIPRTPDKPGKGSFWTLHPDSGNMFENGC--YLRRQ---KRFKDEKKEAIR------------- 315
            ||:||..|.||||::|.|.|.|.::|..|.  .|||:   .|.|...|...|             
Mouse   232 VKVPRHYDDPGKGNYWMLDPSSDDVFIGGTTGKLRRRSTTSRAKLAFKRGARLTSTGLTFMDRAG 296

  Fly   316 ----------QLHKSPSHSSLEATSPGKKDHEDSHHMHHHHHSRLDHHQHHKEAGGASIAGVNVL 370
                      .||...:.|:|...  |......||.|.:                 :|:...|.|
Mouse   297 SLYWPMSPFLSLHHPRASSTLSYN--GTTSAYPSHPMPY-----------------SSVLTQNSL 342

  Fly   371 SAAHS-KDAEALAMLH-ANAELCLSQQPQHVPTHHHHQHHQLQQEELSAMMANRCHPSLITDYHS 433
            ...|| ..|..|::.. .|.|         :|...||    |....|:|.:.  |..|:      
Mouse   343 GNNHSFSTANGLSVDRLVNGE---------IPYATHH----LTAAALAASVP--CGLSV------ 386

  Fly   434 SMHPLKQEPSGYTPSSHPFSINRL----------LPTESKADIKMYDMSQYAGYNALSPLTNSHA 488
                    |...|.|.:|.|:|.|          :|..|........||..|..::.||  .:.:
Mouse   387 --------PCSGTYSLNPCSVNLLAGQTSYFFPHVPHPSMTSQTSTSMSARAASSSTSP--QAPS 441

  Fly   489 ALGQDSYYQSLGYHAPAGTTSL 510
            .|..:|...||    |:.||.|
Mouse   442 TLPCESLRPSL----PSFTTGL 459

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
fkhNP_001263038.1 Forkhead_N <120..209 CDD:254796 15/88 (17%)
FH 210..298 CDD:214627 51/87 (59%)
Foxg1NP_001153584.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 31..173 39/200 (20%)
FH 173..261 CDD:214627 51/87 (59%)
Required for interaction with TLE6. /evidence=ECO:0000269|PubMed:16314515 241..336 25/113 (22%)
Interaction with KDM5B. /evidence=ECO:0000250 375..398 8/38 (21%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 419..447 6/29 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000010
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.910

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