DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment fkh and Foxd3

DIOPT Version :9

Sequence 1:NP_001263038.1 Gene:fkh / 43383 FlyBaseID:FBgn0000659 Length:692 Species:Drosophila melanogaster
Sequence 2:NP_034555.3 Gene:Foxd3 / 15221 MGIID:1347473 Length:469 Species:Mus musculus


Alignment Length:549 Identity:157/549 - (28%)
Similarity:207/549 - (37%) Gaps:181/549 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   147 GSPL--GNMGGCMAMSAASMSAAGLSGTYGAMPPGSREMETGSPNSLGRSRVDKPTTYRRSYTHA 209
            |:|.  |..||..|::......|| ||..|.:.|...:      |||                 .
Mouse    90 GAPEADGCKGGEDAVTGGGGPGAG-SGATGGLTPNKPK------NSL-----------------V 130

  Fly   210 KPPYSYISLITMAIQNNPTRMLTLSEIYQFIMDLFPFYRQNQQRWQNSIRHSLSFNDCFVKIPRT 274
            |||||||:||||||..:|.:.||||.|.:||.:.||:||:....|||||||:||.|||||||||.
Mouse   131 KPPYSYIALITMAILQSPQKKLTLSGICEFISNRFPYYREKFPAWQNSIRHNLSLNDCFVKIPRE 195

  Fly   275 PDKPGKGSFWTLHPDSGNMFENGCYLRRQKRFKDEKKEAIRQ----LHKSPSHSSLEATSPGKKD 335
            |..||||::|||.|.|.:||:||.:|||:||||..::|.:|:    :.:|....|| |.:.|...
Mouse   196 PGNPGKGNYWTLDPQSEDMFDNGSFLRRRKRFKRHQQEHLREQTALMMQSFGAYSL-AAAAGAGP 259

  Fly   336 HEDSHHMHHHHHSRLDHHQHHKEAGGASIAGVNVLSAAHSKDAEALAMLHANAELCLSQQPQHVP 400
            :...:.:|                 .|:.||      |:|..|.|.|...|.|    .|.|..:|
Mouse   260 YGRPYGLH-----------------PAAAAG------AYSHPAAAAAAAAAAA----LQYPYALP 297

  Fly   401 THHHHQHHQLQQEELSAMMANRCHPSLITDYHSSMHPLKQEPSGYTPSSHPFSINRLLPTESKAD 465
            .                 :|....|::         ||.  |||        .:.|         
Mouse   298 P-----------------VAPVLPPAV---------PLL--PSG--------ELGR--------- 317

  Fly   466 IKMYDMSQYAGYNALSPLTNSHAALGQDSYYQSLGYHAPAGTTSLXHHQYPLAXGRAEQMLRSQQ 530
             |........|.:....|....||..      :.|....||||||.                   
Mouse   318 -KAAAFGSQLGPSLQLQLNTLGAAAA------AAGTAGAAGTTSLI------------------- 356

  Fly   531 QQHLQQQHQQHQQQQQQHQLHQQQQQMQQSAQQLTSASNTPATSAKASGKAGSASASGSGSGSGS 595
                                     :.:.||:...|..|.....:.|.|  |||...|||.|:|.
Mouse   357 -------------------------KSEPSARPSFSIENIIGAGSAAPG--GSAGGGGSGGGAGG 394

  Fly   596 GSGSNYSQKLQQQHQQQQQQQAAAQQQHHQQQQQLLQELQEDSSNITSDLSEEQLQQHQAAQQQL 660
            |.||......|...:.....|:||....||.     ..|...::.|...||           ..|
Mouse   395 GGGSGGGGGAQSFLRPPGTVQSAALMATHQP-----LSLSRTTATIAPILS-----------VPL 443

  Fly   661 YNNYQQYAAAAGYRNWNHGLAFNGAAALQ 689
            ...:.|.||:|         |...|||:|
Mouse   444 SGQFLQPAASA---------AAAAAAAVQ 463

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
fkhNP_001263038.1 Forkhead_N <120..209 CDD:254796 15/63 (24%)
FH 210..298 CDD:214627 56/87 (64%)
Foxd3NP_034555.3 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..127 12/43 (28%)
Forkhead 131..217 CDD:278670 55/85 (65%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 379..409 13/31 (42%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000010
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.910

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