DRSC/TRiP Functional Genomics Resources

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Protein Alignment fkh and foxe3

DIOPT Version :9

Sequence 1:NP_001263038.1 Gene:fkh / 43383 FlyBaseID:FBgn0000659 Length:692 Species:Drosophila melanogaster
Sequence 2:XP_002931457.1 Gene:foxe3 / 100495102 XenbaseID:XB-GENE-480592 Length:398 Species:Xenopus tropicalis


Alignment Length:431 Identity:132/431 - (30%)
Similarity:188/431 - (43%) Gaps:92/431 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   123 MGAAAMNSMGGNC-MTPSSM-SYASMGSPLGNMGGCMAMSAASMSAAGLSGTYGAMPPGSREMET 185
            |..|:.....|.| ||..|. |.....||:        .|:.||.:.| |......|.|:...|.
 Frog     1 MNLASFPYYSGMCTMTADSQHSPTEAASPI--------PSSPSMDSPG-SVRVKCEPKGTCSPEE 56

  Fly   186 G--------SPNSLGRSRVDKPTTYRRSYTHAKPPYSYISLITMAIQNNPTRMLTLSEIYQFIMD 242
            |        :..|.||.|       :|.....|||||||:||.|||.|:|.|.|||..||:|||:
 Frog    57 GVNGLPDEHNQASGGRRR-------KRPIQRGKPPYSYIALIAMAIANSPERKLTLGGIYKFIME 114

  Fly   243 LFPFYRQNQQRWQNSIRHSLSFNDCFVKIPRTPDKPGKGSFWTLHPDSGNMFENGCYLRRQKRFK 307
            .|||||:|.::|||||||:|:.|||||||||.|..||||::|||.|.:.:||:||.:|||:||||
 Frog   115 RFPFYRENSKKWQNSIRHNLTLNDCFVKIPREPGHPGKGNYWTLDPAAEDMFDNGSFLRRRKRFK 179

  Fly   308 DEKKEAIRQLHKSPSH----SSLEATSPGKKDHEDSHH----------MHHHHHSRLDHHQHHKE 358
            .      ..|...|.:    |:...|..|:..:..|.:          :|..||..:.|  |::.
 Frog   180 R------TDLTTYPGYMQNSSAFTPTPAGRASYPTSIYSSVGSGYNPQIHQTHHPAMVH--HYQP 236

  Fly   359 AGGASIAGVNVLSAAHSKDAEALAMLHANAELCLSQQPQHVPTHHH------------------- 404
            .|||......:.|.....:.:::......|||          |||.                   
 Frog   237 PGGAGQGQHRMFSIDSLINQQSVMQPSPGAEL----------THHSLGLNGDLGNMTSSCSVGDL 291

  Fly   405 --HQHHQLQQEELSAMM---ANRCHPSLITDYHSSMHPLKQEPSGYTP-SSHPFSINRLLPTESK 463
              .|...:....:.:::   :|....:|...|.||...|...|:.|:| :|..:..:..|...|.
 Frog   292 SCFQTQSISPTGVGSLLNRPSNAVSSNLTYSYSSSPPHLSVPPASYSPNNSQLYGPSSRLAMRSG 356

  Fly   464 ADIKMYD---------MSQYAGYNALSPLTNSHAALGQDSY 495
            :.:...|         |:....||..|.:..::.|.|.:.|
 Frog   357 SCVDHTDQLLSLPGTQMNGVCQYNNSSYMRQTNFASGLERY 397

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
fkhNP_001263038.1 Forkhead_N <120..209 CDD:254796 24/95 (25%)
FH 210..298 CDD:214627 58/87 (67%)
foxe3XP_002931457.1 FH 82..170 CDD:214627 58/87 (67%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000010
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
22.000

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