DRSC/TRiP Functional Genomics Resources

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Protein Alignment fkh and foxl1

DIOPT Version :9

Sequence 1:NP_001263038.1 Gene:fkh / 43383 FlyBaseID:FBgn0000659 Length:692 Species:Drosophila melanogaster
Sequence 2:XP_012817795.1 Gene:foxl1 / 100038263 XenbaseID:XB-GENE-5880620 Length:406 Species:Xenopus tropicalis


Alignment Length:442 Identity:126/442 - (28%)
Similarity:179/442 - (40%) Gaps:139/442 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   148 SPLGNMGGCMAMSAASMSAAGLSGTYGAMPPGSREMETGSPNSLGRSRVDKPTTYRRSYTHAKPP 212
            |||..:|       :.:..:.|...|||.......:...|.|.:  ||.:.|         .|||
 Frog     7 SPLPQLG-------SDLHRSPLVYLYGAERALVPALGFASTNVI--SRQEPP---------QKPP 53

  Fly   213 YSYISLITMAIQNNPTRMLTLSEIYQFIMDLFPFYRQNQQRWQNSIRHSLSFNDCFVKIPRTPDK 277
            ||||:||.|||:::|...:||:.|||||||.||||..|:|.|||||||:||.||||:|:||...:
 Frog    54 YSYIALIAMAIKDSPDHRVTLNGIYQFIMDRFPFYHDNKQGWQNSIRHNLSLNDCFIKVPREKGR 118

  Fly   278 PGKGSFWTLHPDSGNMFENGCYLRRQKR--------FKDEKKEAIR------------------- 315
            |||||:|||.|...:|||||.:.||:::        .|..|.||..                   
 Frog   119 PGKGSYWTLDPKCLDMFENGNFRRRKRKPKPILCQEGKRHKAEAAEYRLADAACKGTTCKVAGNT 183

  Fly   316 --------QLHKSPSH----------SSLE---------ATSPGKKDHEDS-------HHMHHHH 346
                    .|.:.|:.          ||.|         .|||..:.|...       :.:|...
 Frog   184 GQNGSQDAPLGRKPTSACEKDSAGEMSSSEDEGGSGDYIKTSPAPECHNQERTSGTYWNSLHPSF 248

  Fly   347 H-------------SRLDHHQHHKEAG-----------GASIAGVNVLSA----AHSKDAEALAM 383
            :             |:.:..|.|::..           ||...|.|...|    |:.|:||.|:.
 Frog   249 YVSVPLLSDQVTLSSKREGSQAHEQGNRLLACGAQGHLGAPSPGSNNEKAGATDANCKEAEQLSQ 313

  Fly   384 LHANA---ELCLSQQPQHVP---THHHHQHHQLQQEELSAMMANRCHPSLITDYHSSMHPLKQEP 442
            ..|.:   :..||:..|..|   ........::.::.::|  :.|||.::              |
 Frog   314 KSARSFSIDSILSRSDQSAPECGAPAPPAVSKVPEDNVAA--SYRCHAAV--------------P 362

  Fly   443 SGYTPSSHPFSINRLLPTESKADIKMYDMSQYAGYNALS--PLTNSHAALGQ 492
            |   ||..|. .|..|..:.:...|.|.:    |...:|  |||.|.|...|
 Frog   363 S---PSLCPL-FNASLMVDPQVQGKFYQI----GLPIISYFPLTLSDARFAQ 406

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
fkhNP_001263038.1 Forkhead_N <120..209 CDD:254796 13/60 (22%)
FH 210..298 CDD:214627 57/87 (66%)
foxl1XP_012817795.1 Forkhead 50..136 CDD:365978 54/85 (64%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000010
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.910

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