DRSC/TRiP Functional Genomics Resources

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Protein Alignment fkh and foxf2b

DIOPT Version :9

Sequence 1:NP_001263038.1 Gene:fkh / 43383 FlyBaseID:FBgn0000659 Length:692 Species:Drosophila melanogaster
Sequence 2:XP_003200754.1 Gene:foxf2b / 100002904 ZFINID:ZDB-GENE-041001-130 Length:429 Species:Danio rerio


Alignment Length:464 Identity:124/464 - (26%)
Similarity:187/464 - (40%) Gaps:143/464 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   149 PLGNMGGCMA-MSAASMSAAGLSGTYGAMP-----PGSREMETGSPNSLG----RSRVDKP---- 199
            |..:..|..: ::|..|:.....|..|:.|     |.:..:..|..||.|    .|.|.|.    
Zfish    39 PFSSDNGLFSYVTAGPMTTESSHGPLGSTPPTRTSPATTALHPGLMNSTGNLEEHSAVSKSKKTN 103

  Fly   200 TTYRRSYTHAKPPYSYISLITMAIQNNPTRMLTLSEIYQFIMDLFPFYRQNQQRWQNSIRHSLSF 264
            :..||.   .|||||||:||.||||:.||:.|||||||||:...|||:|.:.|.|:||:||:||.
Zfish   104 SGLRRP---EKPPYSYIALIVMAIQSAPTKRLTLSEIYQFLQTRFPFFRGSYQGWKNSVRHNLSL 165

  Fly   265 NDCFVKIPRTPDKPGKGSFWTLHPDSGNMFENGCYLRRQKRFKDEKKEAIRQLHK---------- 319
            |:||:|:|:...:||||.:||:.|.|..|||.|.:.||.:.|: .|.:|::.:::          
Zfish   166 NECFIKLPKGLGRPGKGHYWTIDPTSEFMFEEGSFRRRPRGFR-RKCQAMKPMYRMMNGLGFGSA 229

  Fly   320 ---------SPS-----HSS---LEATSPGKKDHEDSHHMHHHHHSRLDHHQHHKEAGGASIAGV 367
                     ||:     |||   |:.:..|.:.....||.|....||..:.......|....|..
Zfish   230 ILPQSFDYQSPTGALACHSSGYNLDLSGSGYESISSGHHGHMSPSSRHGYMSSCPMPGNGDYAVE 294

  Fly   368 NVLSAAHSKDAEALAMLHANAELCLSQQPQHVPTHHHHQHHQLQQEELSAMMANRCHPSLITDYH 432
            :..|...|..|.|.|:            ..|.|           ..|.:|:.|:           
Zfish   295 SNTSPVPSSPAVAGAL------------EGHSP-----------YSESTALWAS----------- 325

  Fly   433 SSMHPLKQ--------EPSGYTPSSHPFSINRLLPTES---KADIKMYDMSQYAGYNA------- 479
            |:...|||        :|:|..|....:|:.:....:|   .||:.: .:|:|..:::       
Zfish   326 SNSSYLKQANTITSNSQPTGQHPGIFTYSLEQGYIQQSARDNADMSV-GLSRYPTHSSPVGERKD 389

  Fly   480 ----LSPLTNSHAALGQDSYYQSLGYHAPAGTTSLXHHQYPLAXGRAEQMLRSQQQQHLQQQHQQ 540
                .:.:|:.|.:.|        ||:         ||                        |..
Zfish   390 FMLNFNGITSFHPSAG--------GYY---------HH------------------------HHH 413

  Fly   541 HQQQQQQHQ 549
            |...|..||
Zfish   414 HHHHQSMHQ 422

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
fkhNP_001263038.1 Forkhead_N <120..209 CDD:254796 17/73 (23%)
FH 210..298 CDD:214627 52/87 (60%)
foxf2bXP_003200754.1 FH 111..199 CDD:214627 52/87 (60%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000010
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.910

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