DRSC/TRiP Functional Genomics Resources

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Protein Alignment mIF2 and infB

DIOPT Version :10

Sequence 1:NP_651621.2 Gene:mIF2 / 43382 FlyBaseID:FBgn0039588 Length:696 Species:Drosophila melanogaster
Sequence 2:NP_417637.1 Gene:infB / 947684 ECOCYCID:EG10505 Length:890 Species:Escherichia coli


Alignment Length:694 Identity:263/694 - (37%)
Similarity:385/694 - (55%) Gaps:98/694 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 HVSAARLKRRKTAEEKKSPRIIEYSPKKFQTAGGGASD--------------------IWRHMTV 78
            :..|||.|:.....|.|:.|  |.:....:...||...                    |...:||
E. coli   256 NAKAARPKKGNKHAESKADR--EEARAAVRGGKGGKRKGSSLQQGFQKPAQAVNRDVVIGETITV 318

  Fly    79 AQLAKELERSLDDVQEAMLYVKGADNIEPAFKLA---------DLKIIQEIAKKLGAKTRVVATP 134
            .:||.::.            |||:..|:...||.         |.:..|.:|:::|.|. ::...
E. coli   319 GELANKMA------------VKGSQVIKAMMKLGAMATINQVIDQETAQLVAEEMGHKV-ILRRE 370

  Fly   135 EETNADEQKERDVAPRPPAAPELLQPRPPVVTVMGHVDHGKTTLLDSLRGADVAAGEAGGITQHI 199
            .|.......:||..    ||.|   ||.||||:|||||||||:|||.:|...||:||||||||||
E. coli   371 NELEEAVMSDRDTG----AAAE---PRAPVVTIMGHVDHGKTSLLDYIRSTKVASGEAGGITQHI 428

  Fly   200 GAFTVTLENGERVTFLDTPGHAAFSAMRARGAVATDIIVLVVAAEDGVMAQTREVIQLAKEAQVP 264
            ||:.|..||| .:|||||||||||::||||||.||||:||||||:||||.||.|.||.||.||||
E. coli   429 GAYHVETENG-MITFLDTPGHAAFTSMRARGAQATDIVVLVVAADDGVMPQTIEAIQHAKAAQVP 492

  Fly   265 IIVALNKIDKPEANIEKSKRELAQMGLALEEHGGDVQVIPISALKGTNLELLAEAVSTQATLMGL 329
            ::||:||||||||:.::.|.||:|.|:..||.||:.|.:.:||..||.::.|.:|:..||.::.|
E. coli   493 VVVAVNKIDKPEADPDRVKNELSQYGILPEEWGGESQFVHVSAKAGTGIDELLDAILLQAEVLEL 557

  Fly   330 KADPTGLVEGIVVESKTDPRRGKLSTAIVSRGTLRKGSVLLSGLAHAKVRGLFDHNGQPLSEAPP 394
            ||...|:..|.|:||..|..||.::|.:|..|||.||.::|.|..:.:||.:.:..||.:.||.|
E. coli   558 KAVRKGMASGAVIESFLDKGRGPVATVLVREGTLHKGDIVLCGFEYGRVRAMRNELGQEVLEAGP 622

  Fly   395 GTPVEILGWRELPLAGDLILEVETEKKAHAVLKYREHESQQEKIESSSDEIRKKEEEHQAKYRAE 459
            ..||||||...:|.|||.:..|..||||..|..||:.:.::.|:                   |.
E. coli   623 SIPVEILGLSGVPAAGDEVTVVRDEKKAREVALYRQGKFREVKL-------------------AR 668

  Fly   460 REARRLAGRFRMRGGQRVKQVDENEGK-PRVSVIIKGDVHGSVEAILDVLETYNSNESCRLDIVH 523
            ::..:|...|          .:..||: ..|::::|.||.||||||.|.|...:::| .::.|:.
E. coli   669 QQKSKLENMF----------ANMTEGEVHEVNIVLKADVQGSVEAISDSLLKLSTDE-VKVKIIG 722

  Fly   524 YGVGNVTEGDLELAKAFHAIIYAFAVETP----QLKAAKEVNIRSYNIIYRLIDDLKEQLSSKLP 584
            .|||.:||.|..||.|.:||:..|.|...    ::..|:.:::|.|::||.|||::|..:|..|.
E. coli   723 SGVGGITETDATLAAASNAILVGFNVRADASARKVIEAESLDLRYYSVIYNLIDEVKAAMSGMLS 787

  Fly   585 PVEVEEVLGEANVLQNFLINEGRKEVPVAGCRCTKGVLKKAQKFRLLRDGEVVYDGPLESMRHLK 649
            |...::::|.|.|...|   :..|...:|||..|:||:|:....|:|||..|:|:|.|||:|..|
E. coli   788 PELKQQIIGLAEVRDVF---KSPKFGAIAGCMVTEGVVKRHNPIRVLRDNVVIYEGELESLRRFK 849

  Fly   650 NEVDTIKKDVECGL---RFRDTKVLPQAGDILQCYTTKMEAQQT 690
            ::|:.::..:|||:   .:.|.:    .||:::.:.. :|.|:|
E. coli   850 DDVNEVRNGMECGIGVKNYNDVR----TGDVIEVFEI-IEIQRT 888

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mIF2NP_651621.2 InfB 159..688 CDD:440298 229/536 (43%)
infBNP_417637.1 PTZ00121 <19..>281 CDD:173412 8/26 (31%)
IF2_assoc 56..94 CDD:429947
IF2_N 314..364 CDD:428110 14/61 (23%)
InfB 388..889 CDD:440298 232/543 (43%)
Blue background indicates that the domain is not in the aligned region.

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