DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment mIF2 and IFM1

DIOPT Version :9

Sequence 1:NP_651621.2 Gene:mIF2 / 43382 FlyBaseID:FBgn0039588 Length:696 Species:Drosophila melanogaster
Sequence 2:NP_014619.1 Gene:IFM1 / 854135 SGDID:S000005383 Length:676 Species:Saccharomyces cerevisiae


Alignment Length:676 Identity:232/676 - (34%)
Similarity:374/676 - (55%) Gaps:78/676 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 LHFSRAVTQWQLPLAFQREFHVSAARLKRRKTAEEKKSPRIIEYSPKKFQTAGGGASDIWRHMTV 78
            || ||.:.|       ||.:    |:.|||....:|      |..|..|        .|..:::|
Yeast    30 LH-SRDICQ-------QRWY----AKGKRRNQISKK------ELKPLNF--------SIPNYISV 68

  Fly    79 AQLAK----ELERSLDDVQEAMLYVKGADNIEPAFKLADLKIIQEIAKKLGAKTRVVATPEETNA 139
            .:||.    .:||.:.|     |...|.:||...:.|:. :.::.|.::.......::|  .||.
Yeast    69 NKLANLLNCRVERLIKD-----LTALGFENITTTYILSK-EYVELILQEYNFALPNLST--STNL 125

  Fly   140 DEQKERDVAPRPPAAPELLQPRPPVVTVMGHVDHGKTTLLDSLRGADVAAGEAGGITQHIGAFTV 204
            |...:.   .:.|..|:||..|.||||:||||||||||::|.||.:.|.|.|.||||||||||.:
Yeast   126 DNVYDE---LKSPVNPKLLTKRAPVVTIMGHVDHGKTTIIDYLRKSSVVAQEHGGITQHIGAFQI 187

  Fly   205 TL-ENGERVTFLDTPGHAAFSAMRARGAVATDIIVLVVAAEDGVMAQTREVIQLAKEAQVPIIVA 268
            |. ::|:::|||||||||||..||.|||..||||||||:.||.:|.||.|.|:.||.:...:|:|
Yeast   188 TAPKSGKKITFLDTPGHAAFLKMRERGANITDIIVLVVSVEDSLMPQTLEAIKHAKNSGNEMIIA 252

  Fly   269 LNKIDK------PEANIEKSKRELAQMGLALEEHGGDVQVIPISALKGTNLELLAEAVSTQATLM 327
            :.|||:      .|..|||...:|...|:.:|:.|||||||||||..|.|::||.|::...:.:|
Yeast   253 ITKIDRIPQPKEREKKIEKVINDLIVQGIPVEKIGGDVQVIPISAKTGENMDLLEESIVLLSEVM 317

  Fly   328 GLKAD--PTGLVEGIVVESKTDPRRGKLSTAIVSRGTLRKGSVLLSGLAHAKVRGLFDHNGQPLS 390
            .::|:  |..:.||.::||:...:.|.::|.:|.:|||:||.:|:.|....|::.|.|..|.|:.
Yeast   318 DIRAENSPKTIAEGWIIESQVKKQVGNVATVLVKKGTLQKGKILICGNTFCKIKNLIDDKGIPIL 382

  Fly   391 EAPPGTPVEILGWRELPLAGDLILEVETEKKAHAVLKYREHESQQEK----IESSSDEIRKKEEE 451
            :|.|....|:|||:::|..||.:::|::|..|...:..|:...:.:|    :|..::|....:|:
Yeast   383 KATPSYATEVLGWKDVPHVGDEVIQVKSEAIAKKFISKRQDLIEVQKNSSIVEKLNEERALAKEQ 447

  Fly   452 HQAKYRAEREARRLAGRFRMRGGQRVKQVDENEGKPRVSVIIKGDVHGSVEAILDVLETYNSNES 516
            |..| ..|.|             ..|::.::|.|...::.|||.||.||.||:.:.:.:. .|:.
Yeast   448 HLNK-ELEHE-------------NTVQEHEQNTGPKLINYIIKCDVSGSAEAVSESISSL-GNDE 497

  Fly   517 CRLDIVHYGVGNVTEGDLELAKAFHAIIYAFAV-----ETPQLKAAKEVNIRSYNIIYRLIDDLK 576
            .|.:::...||..||.||::|:...:.|..|.:     |....:|.  :.|:.||:||:||:|:.
Yeast   498 VRCNVISSSVGIPTESDLKMAQITESTILCFNLGNLPSEVINNRAG--IKIKQYNVIYKLIEDVT 560

  Fly   577 EQLSSKLPPVEVEEVLGEANVLQNFLINEGRKEVPVAGCRCTKGVLKKAQKFRLLR--DGEVVYD 639
            |.|:..|.|:..::::...:|.:.|.....:|.:.:|||:...||:||....:::|  :.:|::|
Yeast   561 ETLTENLKPIFEKKIVSTVDVRETFDFRLKKKIIRIAGCKVNNGVIKKNSLVQVVRGPNEDVIFD 625

  Fly   640 GPLESMRHLKNEVDTIKKDVECGLRF 665
            |.:.:::|.|::|..:.|..|||:.|
Yeast   626 GKISTLKHNKDDVAEVSKGHECGITF 651

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mIF2NP_651621.2 InfB 158..689 CDD:223606 197/528 (37%)
IF2_eIF5B 163..327 CDD:206674 93/170 (55%)
IF2_mtIF2_II 336..431 CDD:293903 32/94 (34%)
IF-2 482..575 CDD:288813 31/97 (32%)
mtIF2_IVc 593..680 CDD:293893 22/75 (29%)
IFM1NP_014619.1 IF2_N 63..114 CDD:398434 12/56 (21%)
InfB 141..676 CDD:223606 197/528 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 169 1.000 Domainoid score I785
eggNOG 1 0.900 - - E1_COG0532
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 352 1.000 Inparanoid score I391
Isobase 1 0.950 - 0 Normalized mean entropy S1351
OMA 1 1.010 - - QHG56520
OrthoFinder 1 1.000 - - FOG0004112
OrthoInspector 1 1.000 - - oto99363
orthoMCL 1 0.900 - - OOG6_100987
Panther 1 1.100 - - LDO PTHR43381
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2156
SonicParanoid 1 1.000 - - X2379
TreeFam 1 0.960 - -
1413.810

Return to query results.
Submit another query.