DRSC/TRiP Functional Genomics Resources

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Protein Alignment mIF2 and AT1G76720

DIOPT Version :9

Sequence 1:NP_651621.2 Gene:mIF2 / 43382 FlyBaseID:FBgn0039588 Length:696 Species:Drosophila melanogaster
Sequence 2:NP_001322567.1 Gene:AT1G76720 / 844006 AraportID:AT1G76720 Length:1224 Species:Arabidopsis thaliana


Alignment Length:724 Identity:173/724 - (23%)
Similarity:268/724 - (37%) Gaps:236/724 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    79 AQLAKELERSLDDVQEAMLYVKGADNIEPAFKLADLKI------IQEIAKK-------------- 123
            |.:|:|.....||..:|    |..||:       ||||      .|.:.||              
plant   556 ADVAQENGVEEDDEWDA----KSWDNV-------DLKIDDKEEEAQPVVKKELKAHDSDHETEKP 609

  Fly   124 -----------LGAKTRVVATPEETNADEQKERDVAPRPPAAPELLQP-----RPPVVTVMGHVD 172
                       .||   |.|..|..:|..|.:|....:..|..|.::.     |..:..:|||||
plant   610 TAKPAGMSKLTTGA---VKAISEVEDAATQTKRAKKGKCLAPSEFIKEGGENLRSIICCIMGHVD 671

  Fly   173 HGKTTLLDSLRGADVAAGEAGGITQHIGAFTVTLEN-GER--------------VTFLDTPGHAA 222
            .|||.|||.:||.:|..||||||||.|||.....:| .||              :..:|||||.:
plant   672 SGKTKLLDCIRGTNVQEGEAGGITQQIGATYFPAKNIRERTRELKADAKLKVPGLLVIDTPGHES 736

  Fly   223 FSAMRARGAVATDIIVLVVAAEDGVMAQTREVIQLAKEAQVPIIVALNKIDK-------PEANIE 280
            |:.:|:||:...|:.:|||..:.|:..||.|.:.|.:......|:||||:|:       ..|.|.
plant   737 FTNLRSRGSSLCDLAILVVDIKHGLEPQTIESLNLLRMRNTEFIIALNKVDRLYGWKTCKNAPIV 801

  Fly   281 KSKR-------------------ELAQMGLALE------EHGGDVQVIPISALKGTNL-ELLAEA 319
            |:.:                   :..:.||..|      |.|....::|.||..|..: :||...
plant   802 KAMKQQNKDVTNEFNIRLTDIITQFKEQGLNTEIYYKNKEMGETFSIVPTSAKSGEGVPDLLLWL 866

  Fly   320 VSTQATLMGLKADPTGLVEGIVVESKTDPRRGKLSTAIVSRGTLRKG-SVLLSGL---------- 373
            |......|..|......|:..|:|.|.....|.....::..|.|.:| .:::.||          
plant   867 VQWAQKTMVEKLTYVDEVQCTVLEVKVIEGHGTTIDVVLVNGELHEGDQIVVCGLQGPIVTTIRA 931

  Fly   374 -------AHAKVRGLFDHN------------GQPLSEAPPGTPVEILGWRELPLAGDLILEVETE 419
                   ...:|:|.:.|:            .|.|..|..||.:.::|..:         ::|..
plant   932 LLTPHPMKELRVKGTYLHHKEIKAAQGIKITAQGLEHAIAGTSLHVVGPDD---------DIEAM 987

  Fly   420 KKAHAVLKYREHESQQEKIESSSDEIRKKEEEHQAKYRAEREARRLAGRFRMRGGQRVKQVDENE 484
            |           ||..|.:||....|.|..|                                  
plant   988 K-----------ESAMEDMESVLSRIDKSGE---------------------------------- 1007

  Fly   485 GKPRVSVIIKGDVHGSVEAILDVLETYNSNESCRLDIVHYGVGNVTEG------DLELAKAFHAI 543
                 .|.::....||:||:|:.|:|...|..            |:||      |....|.: |.
plant  1008 -----GVYVQTSTLGSLEALLEFLKTPAVNIP------------VSEGYNEGWSDAREEKEY-AT 1054

  Fly   544 IYAFAVE--TPQLKAAKEVNIRSY--NIIYRL-------IDDLKEQLSSKLPPVEVEEVLGEA-- 595
            |.||.|:  |...:.|.|:.::.:  :|||:|       |:::||:        :.:|..|||  
plant  1055 ILAFDVKVTTEARELADEMGVKIFCADIIYQLFNQFQVYIENIKEE--------KKKESAGEAVF 1111

  Fly   596 ----NVLQNFLINEGRKEVPVAGCRCTKGVLKKAQKFRLLRDGEVVYD-GPLESMRHLKNEVDTI 655
                .:|.|.:.|  :::..:.|.:...|:||....  :...|....| |.:.|:.:....||..
plant  1112 PCVLQILPNCVFN--KRDPIILGVKVHDGILKIGTP--ICVPGREFTDIGRIASIENNHKPVDYA 1172

  Fly   656 KKDVECGLR 664
            :|..|..::
plant  1173 EKGDEVAIK 1181

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mIF2NP_651621.2 InfB 158..689 CDD:223606 147/614 (24%)
IF2_eIF5B 163..327 CDD:206674 67/211 (32%)
IF2_mtIF2_II 336..431 CDD:293903 21/124 (17%)
IF-2 482..575 CDD:288813 27/109 (25%)
mtIF2_IVc 593..680 CDD:293893 18/79 (23%)
AT1G76720NP_001322567.1 PRK04004 656..1220 CDD:235195 147/610 (24%)
IF2_eIF5B 663..872 CDD:206674 67/208 (32%)
aeIF5B_II 883..993 CDD:293904 23/129 (18%)
IF-2 996..1090 CDD:288813 31/145 (21%)
IF2_aeIF5B_IV 1113..1207 CDD:293911 15/73 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0532
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1124591at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.820

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