DRSC/TRiP Functional Genomics Resources

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Protein Alignment mIF2 and AT4G11160

DIOPT Version :9

Sequence 1:NP_651621.2 Gene:mIF2 / 43382 FlyBaseID:FBgn0039588 Length:696 Species:Drosophila melanogaster
Sequence 2:NP_192854.2 Gene:AT4G11160 / 826717 AraportID:AT4G11160 Length:743 Species:Arabidopsis thaliana


Alignment Length:691 Identity:266/691 - (38%)
Similarity:374/691 - (54%) Gaps:89/691 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 REFHVSAARLKRRK-----------------------TAEEKKS---PRIIEYSPKKFQTAG--- 66
            |.||.|...|.:||                       :..|||:   |....|.|.:.:...   
plant    79 RYFHASRETLAKRKEDADRLLSHRERKKQTVKTKGKFSKREKKTDKPPVEAPYVPPRLKRLAKGL 143

  Fly    67 -GGASDIWRHMTVAQLAKELERSLDDVQEAMLYVKGADNIEPAFKLADLKIIQEIAKKLGAKTRV 130
             |...||:..||:.:|:|....|:..:|..::.|  .:.....|....:.:.:.:|.::|...| 
plant   144 PGKTVDIFEGMTLLELSKRTGESVAVLQSILINV--GETFSSEFDTISVDVAELLAMEIGINVR- 205

  Fly   131 VATPEETNADEQKERDVAPRPPAAPELLQPRPPVVTVMGHVDHGKTTLLDSLRGADVAAGEAGGI 195
                 ..::.|..|             :.|||||||||||||||||:|||:||...|||.|||||
plant   206 -----RQHSTEGSE-------------ILPRPPVVTVMGHVDHGKTSLLDALRNTSVAAREAGGI 252

  Fly   196 TQHIGAFTVTL-ENGERVTFLDTPGHAAFSAMRARGAVATDIIVLVVAAEDGVMAQTREVIQLAK 259
            |||:|||.|.: ::|..:||||||||||||.||||||..|||:||||||:||||.||.|.|..|:
plant   253 TQHVGAFVVGMPDSGTSITFLDTPGHAAFSEMRARGAAVTDIVVLVVAADDGVMPQTLEAIAHAR 317

  Fly   260 EAQVPIIVALNKIDKPEANIEKSKRELAQMGLALEEHGGDVQVIPISALKGTNLELLAEAVSTQA 324
            .|.||::||:||.|||.||.||.|.:|...|:.||:.||:||.:.:||.|.|.|:.|.||:..||
plant   318 SANVPVVVAINKCDKPGANPEKVKYQLTSEGIELEDIGGNVQAVEVSAAKSTGLDKLEEALLLQA 382

  Fly   325 TLMGLKADPTGLVEGIVVESKTDPRRGKLSTAIVSRGTLRKGSVLLSGLAHAKVRGLFDHNGQPL 389
            ..|.|||...|..:..|||::.|..||.|:|.||..|||.:|..::.|....::|.:.|..|:..
plant   383 VDMDLKARVDGPAQAYVVEARLDKGRGPLATIIVKAGTLVRGQHVVIGCQWGRLRAIRDMIGKTT 447

  Fly   390 SEAPPGTPVEILGWRELPLAGDLILEVETEKKAHAVLKYREHESQQEKIESSSDEIRKKEEEHQA 454
            ..|.|..||||.|.:.||:|||.::.||:|::|..:     .|.::.|.|  .|.:.|.||.   
plant   448 DRATPAMPVEIEGLKGLPMAGDDVIVVESEERARML-----SEGRKRKYE--KDRLLKAEEA--- 502

  Fly   455 KYRAEREARRLAGRFRMRGGQRVKQVDENEGKPRVS--VIIKGDVHGSVEAILDVLETYNSNESC 517
              |.|..|.||             :.:..||..||.  :::|.||.|:.:|:.|.|.|.||.: .
plant   503 --RLEEAAARL-------------ETESEEGFVRVELPIVVKSDVQGTAQAVADALRTLNSPQ-V 551

  Fly   518 RLDIVHYGVGNVTEGDLELAKAFHAIIYAFAVE---TPQLKAAK-EVNIRSYNIIYRLIDDLKEQ 578
            .::|||.|||.::..||:||:|..|.|..|.|:   |..|.||: .|.:..:.:||.|::|:...
plant   552 SVNIVHSGVGAISHSDLDLAQACGACIVGFNVKGGSTGNLSAAQGSVKVFHHRVIYHLLEDIGNL 616

  Fly   579 LSSKLPPVEVEEVLGEANVLQNF-LINEGRKE---VPVAGCRCTKGVLKKAQKFRLLRDGEVVYD 639
            :..|.|.|...||.|||.||..| ::.:.|.|   |.:|||:...|.:.::...||||.||||::
plant   617 IVEKAPGVSEMEVSGEAEVLSIFKILGKRRTEEDGVNIAGCKVMDGRVCRSGLMRLLRSGEVVFE 681

  Fly   640 GPLESMRHLKNEVDTIKKDVECGLRFRDTKVLPQAGDILQC 680
            |...|::..|.:|:.:.|..||||.|.|.... :.||::||
plant   682 GSCASLKREKQDVEQVGKGNECGLVFGDWNDF-RVGDVIQC 721

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mIF2NP_651621.2 InfB 158..689 CDD:223606 237/534 (44%)
IF2_eIF5B 163..327 CDD:206674 104/164 (63%)
IF2_mtIF2_II 336..431 CDD:293903 34/94 (36%)
IF-2 482..575 CDD:288813 37/98 (38%)
mtIF2_IVc 593..680 CDD:293893 34/90 (38%)
AT4G11160NP_192854.2 InfB 217..731 CDD:223606 237/532 (45%)
IF2_eIF5B 220..382 CDD:206674 102/161 (63%)
IF2_mtIF2_II 394..489 CDD:293903 35/99 (35%)
IF-2 523..613 CDD:288813 33/90 (37%)
mtIF2_IVc 631..721 CDD:293893 34/90 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 195 1.000 Domainoid score I908
eggNOG 1 0.900 - - E1_COG0532
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H1840
Inparanoid 1 1.050 396 1.000 Inparanoid score I484
OMA 1 1.010 - - QHG56520
OrthoDB 1 1.010 - - D1124591at2759
OrthoFinder 1 1.000 - - FOG0004112
OrthoInspector 1 1.000 - - oto4003
orthoMCL 1 0.900 - - OOG6_100987
Panther 1 1.100 - - O PTHR43381
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X2379
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1413.840

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