DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment mIF2 and mtif2

DIOPT Version :9

Sequence 1:NP_651621.2 Gene:mIF2 / 43382 FlyBaseID:FBgn0039588 Length:696 Species:Drosophila melanogaster
Sequence 2:NP_001082793.1 Gene:mtif2 / 556465 ZFINID:ZDB-GENE-030131-1092 Length:705 Species:Danio rerio


Alignment Length:694 Identity:322/694 - (46%)
Similarity:461/694 - (66%) Gaps:31/694 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 VTQW--QLPLAFQREFHVSAARLKRRKTAEEKKSPRIIEYSPKKFQTAGGGASDIWRHMTVAQLA 82
            |:.|  :.|....:..|:::.:.|.|...|:.||.  :|...|:       ..:|.:.|:|::||
Zfish    26 VSAWTNKPPYTCSQIRHLASKQDKARFKGEKLKSQ--LEKQQKQ-------EVEIKQRMSVSELA 81

  Fly    83 KELERSLDDVQEAMLYVK-GADNIEPAFKLADLKIIQEIAKKLGAKTRVVATPEETNADEQKERD 146
            ..::|.:|.|.||:|..: ..|.:||...|.: |.|:|..|:.|.|.| .|...||...|.|  |
Zfish    82 SAMKRDIDHVYEALLNTEVDLDELEPDTMLEE-KWIKEAVKRSGMKYR-WAKLVETKVRENK--D 142

  Fly   147 VAPRPPAAPELLQPRPPVVTVMGHVDHGKTTLLDSLRGADVAAGEAGGITQHIGAFTVTLENGER 211
            :..:||..|..|..|.||||:|||:||||||||||||.:.:.|.||||||||||||.|.|.:||:
Zfish   143 IQRQPPPDPAQLVTRAPVVTIMGHIDHGKTTLLDSLRKSQIVAQEAGGITQHIGAFRVELPSGEK 207

  Fly   212 VTFLDTPGHAAFSAMRARGAVATDIIVLVVAAEDGVMAQTREVIQLAKEAQVPIIVALNKIDKPE 276
            :||||||||||||||||||.:.|||::|||||:||||.||.|.|:|||:|:||||||:||.|||:
Zfish   208 ITFLDTPGHAAFSAMRARGTMITDIVILVVAADDGVMKQTIESIELAKKAKVPIIVAVNKCDKPQ 272

  Fly   277 ANIEKSKRELAQMGLALEEHGGDVQVIPISALKGTNLELLAEAVSTQATLMGLKADPTGLVEGIV 341
            |:.::.|:|||...:..|:.||::|.|.:|||||.||..||||..|.|.::.||.||||||||.|
Zfish   273 ADPQRVKQELAGHDVICEDLGGEIQAIHVSALKGDNLLELAEATVTLAEVLELKGDPTGLVEGSV 337

  Fly   342 VESKTDPRRGKLSTAIVSRGTLRKGSVLLSGLAHAKVRGLFDHNGQPLSEAPPGTPVEILGWREL 406
            :||:||..:|.::|||:.|||||||..|::|...||||.:||.|.|.:.||.|...|||:||::|
Zfish   338 IESRTDKGKGPVTTAIIQRGTLRKGCTLVAGKCWAKVRFMFDENNQAVKEAGPSIAVEIVGWKDL 402

  Fly   407 PLAGDLILEVETEKKAHAVLKYREHESQQEKIESSSDEIRKKEEEHQAKYRAEREA-------RR 464
            |.||:.|||||:|::|..|:::|.:..:|:|::.....|..|:::|...|:.|||:       :|
Zfish   403 PSAGEEILEVESEQRAREVVEWRSYMEEQDKLKDEQQVIEAKQKQHHDTYKKERESLAHLSWRQR 467

  Fly   465 LAGRFRM---RGGQRVKQVDENEGKPRVSVIIKGDVHGSVEAILDVLETYNSNESCRLDIVHYGV 526
            .|..::.   :|..|..:..||| :..:.:||||||.|||||:|::||:|::::.|.||:||:||
Zfish   468 RAALYKANKHKGIHRPSERTENE-ELTMPIIIKGDVDGSVEALLNILESYDADDQCLLDVVHFGV 531

  Fly   527 GNVTEGDLELAKAFHAIIYAFAVET----PQLKAAKEVNIRSYNIIYRLIDDLKEQLSSKLPPVE 587
            |:::|.|:.||:.|..|||.|.|..    .||...|.:::|.:.:||:|:|:|||.|||||||..
Zfish   532 GDISEKDINLAETFSGIIYGFNVSAHKSIQQLAEKKGISLRLHRVIYKLLDELKEDLSSKLPPTT 596

  Fly   588 VEEVLGEANVLQNFLINEGRKEVPVAGCRCTKGVLKKAQKFRLLRDGEVVYDGPLESMRHLKNEV 652
            .|.:||||:||..|.:..|:|::.|||||..||.|.|..||||:|..::::||.:.:::|||::|
Zfish   597 EENILGEASVLATFTVTVGKKKLAVAGCRVQKGQLDKKMKFRLIRGRDMIWDGSVTTLKHLKDDV 661

  Fly   653 DTIKKDVECGLRFRDTKVLPQAGDILQCYTTKMEAQQTDWDPGF 696
            .|:|..:||||...:..:..:.||.:.||:.....|:..|||||
Zfish   662 LTVKTGMECGLSLDNEDLEYKPGDAIICYSESEVKQKISWDPGF 705

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mIF2NP_651621.2 InfB 158..689 CDD:223606 274/544 (50%)
IF2_eIF5B 163..327 CDD:206674 108/163 (66%)
IF2_mtIF2_II 336..431 CDD:293903 51/94 (54%)
IF-2 482..575 CDD:288813 44/96 (46%)
mtIF2_IVc 593..680 CDD:293893 36/86 (42%)
mtif2NP_001082793.1 InfB 154..699 CDD:223606 275/545 (50%)
IF2_eIF5B 159..323 CDD:206674 108/163 (66%)
IF2_mtIF2_II 332..425 CDD:293903 50/92 (54%)
IF-2 495..584 CDD:288813 41/88 (47%)
mtIF2_IVc 602..689 CDD:293893 36/86 (42%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170575694
Domainoid 1 1.000 208 1.000 Domainoid score I2815
eggNOG 1 0.900 - - E1_COG0532
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H1840
Inparanoid 1 1.050 581 1.000 Inparanoid score I989
OMA 1 1.010 - - QHG56520
OrthoDB 1 1.010 - - D1124591at2759
OrthoFinder 1 1.000 - - FOG0004112
OrthoInspector 1 1.000 - - oto40792
orthoMCL 1 0.900 - - OOG6_100987
Panther 1 1.100 - - LDO PTHR43381
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2156
SonicParanoid 1 1.000 - - X2379
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1716.800

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