DRSC/TRiP Functional Genomics Resources

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Protein Alignment mIF2 and eIF5B

DIOPT Version :9

Sequence 1:NP_651621.2 Gene:mIF2 / 43382 FlyBaseID:FBgn0039588 Length:696 Species:Drosophila melanogaster
Sequence 2:NP_001246599.1 Gene:eIF5B / 44261 FlyBaseID:FBgn0026259 Length:1144 Species:Drosophila melanogaster


Alignment Length:673 Identity:170/673 - (25%)
Similarity:264/673 - (39%) Gaps:204/673 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   121 AKKLGAKTRVVATPEETNADEQKERDVAPRPPAAPELLQPRPPVVTVMGHVDHGKTTLLDSLRGA 185
            :::|.|:.|::    :..|:.:|:|       :..||   |..||.|:||||.|||.:||.||..
  Fly   528 SRRLRAEARIL----KRQAEAEKKR-------STDEL---RAGVVCVLGHVDTGKTKILDKLRRT 578

  Fly   186 DVAAGEAGGITQHIGAFTVTLENGERVT-----------------FLDTPGHAAFSAMRARGAVA 233
            .|...|||||||.|||..|.:|..:..|                 .:|||||.:||.:|.||:..
  Fly   579 HVQDSEAGGITQQIGATNVPIEAIKEQTKYVKAAAGFEHRLPGLLIIDTPGHESFSNLRNRGSSL 643

  Fly   234 TDIIVLVVAAEDGVMAQTREVIQLAKEAQVPIIVALNKIDK--------------------PEAN 278
            .||.:|||....|:..||.|.|||.|:.:.|.||||||||:                    ....
  Fly   644 CDIAILVVDIMHGLEPQTIESIQLLKKKKCPFIVALNKIDRLYDWKQLARRDVRDVLKEQQSNTQ 708

  Fly   279 IEKSKR------ELAQMGL--ALEEHGGD----VQVIPISALKGTNL------------ELLAEA 319
            :|..:|      :.|:.||  ||.....|    :.::|.||:.|..:            .:||:.
  Fly   709 LEFQQRTKDVILQFAEQGLNAALFYENTDPKTYISLVPTSAISGEGMGNLLFMIADFCQNMLAKR 773

  Fly   320 V----STQATLMGLKADPTGLVEGIVVESKTDPRRGKLSTAIVSRGTLRKGSVLL----SGLAHA 376
            :    ..|||::.:||.| ||              |....||:..|.||:|..::    .|....
  Fly   774 LMYSEELQATVLEVKALP-GL--------------GTTIDAILINGKLREGQTMVVAGTDGPIVT 823

  Fly   377 KVRGLFDHNGQPLSEAPPGTPVEILGWRELPLAGDLILEVETEKKAHAVLKYREHESQQ------ 435
            ::|.|.  ..||:.|                      |.|:     :|.::|:|.::.|      
  Fly   824 QIRSLL--MPQPMKE----------------------LRVK-----NAYVEYKEVKAAQGVKIAA 859

  Fly   436 ---EK--------IESSSDEIRKKEEEHQAKYRAEREARRLAGRFRMRGGQRVKQVDENEGKPRV 489
               ||        |....||:....||      ..||.:......::               .:.
  Fly   860 KDLEKAIAGINLLIAHKPDEVEICTEE------VARELKSALSHIKL---------------AQT 903

  Fly   490 SVIIKGDVHGSVEAILDVLETYNSNESCRLDIVHYGVGNVTEGDLELA------KAFHAIIYAFA 548
            .|.::....||:||:|:.|.|      .::......:|.|.:.|:..|      :|.:|.|.||.
  Fly   904 GVHVQASTLGSLEALLEFLRT------SKIPYSAIRIGPVVKRDVMKASTMLEHEAQYATILAFD 962

  Fly   549 V----ETPQLKAAKEVNIRSYNIIYRLIDDL---KEQLSSKLPPVEVEEVLGEA------NVLQN 600
            |    |..::..:..|.|...:|||.|.|..   :|:|..|    :.||....|      .:|..
  Fly   963 VKIEREAQEMADSLGVKIFQADIIYHLFDKFTAYREELKQK----KREEFRSVAVFPCKLRILPQ 1023

  Fly   601 FLINEGRKEVPVAGCRCTKGVLKKAQKFRLLRDGEVVYDGPLESMRHLKNEVDTIKKDVE-CGLR 664
            |:.|.  ::..|.|.....|::|..... .:...|.|..|.:.|:.....:::..:|..| |   
  Fly  1024 FVFNS--RDPIVMGVMVENGIVKVGTPI-CVPSKEFVDIGIVTSIESNHKQIEFARKGQEIC--- 1082

  Fly   665 FRDTKVLPQAGDILQCYTTKMEA 687
               .|:.|..|:..:.:....||
  Fly  1083 ---VKIDPIPGESPKMFGRHFEA 1102

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mIF2NP_651621.2 InfB 158..689 CDD:223606 162/636 (25%)
IF2_eIF5B 163..327 CDD:206674 77/228 (34%)
IF2_mtIF2_II 336..431 CDD:293903 18/98 (18%)
IF-2 482..575 CDD:288813 26/102 (25%)
mtIF2_IVc 593..680 CDD:293893 18/93 (19%)
eIF5BNP_001246599.1 PRK04004 553..1129 CDD:235195 163/637 (26%)
IF2_eIF5B 557..769 CDD:206674 72/211 (34%)
aeIF5B_II 779..889 CDD:293904 34/159 (21%)
IF-2 890..993 CDD:288813 27/123 (22%)
IF2_aeIF5B_IV 1016..1110 CDD:293911 19/96 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45464674
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0532
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1124591at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR43381
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
54.850

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