DRSC/TRiP Functional Genomics Resources

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Protein Alignment mIF2 and eEF1alpha2

DIOPT Version :9

Sequence 1:NP_651621.2 Gene:mIF2 / 43382 FlyBaseID:FBgn0039588 Length:696 Species:Drosophila melanogaster
Sequence 2:NP_524611.1 Gene:eEF1alpha2 / 43736 FlyBaseID:FBgn0000557 Length:462 Species:Drosophila melanogaster


Alignment Length:557 Identity:115/557 - (20%)
Similarity:177/557 - (31%) Gaps:200/557 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   165 VTVMGHVDHGKTTLLDSLRGADVAAGEAGGI-----------TQHIG------AFTVTLENGER- 211
            :.|:||||.||:|....|      ..:.|||           .|.:|      |:.:.....|| 
  Fly    10 IVVIGHVDSGKSTTTGHL------IYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 68

  Fly   212 ------------------VTFLDTPGHAAFSAMRARGAVATDIIVLVVAA-----EDGVM--AQT 251
                              ||.:|.|||..|......|....|..||:|||     |.|:.  .||
  Fly    69 RGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQT 133

  Fly   252 REVIQLAKEAQV-PIIVALNKIDK-----PEANIEKSKRELAQMGLALEEHGGDVQVIPISALKG 310
            ||...||....| .:||.:||:|.     .||..|:.|:|::.....:..:...|..:|||...|
  Fly   134 REHALLAFTLGVKQLIVGVNKMDSTEPPYSEARYEEIKKEVSSYIKKIGYNPASVAFVPISGWHG 198

  Fly   311 TNLELLAEAVSTQATLMGLKAD-PTGLVEGIVVESKTD----PRR----------------GKLS 354
            .|   :.|.........|...: ..|..||..:....|    |:|                |.:.
  Fly   199 DN---MLEPSEKMPWFKGWSVERKEGKAEGKCLIDALDAILPPQRPTDKPLRLPLQDVYKIGGIG 260

  Fly   355 TAIVSR---GTLRKGSVLLSGLAHAKVRGLFDHNGQPLSEAPPGTPVEILGWRELPLAGDLILEV 416
            |..|.|   |.|:.|.|:               |..|:                     :|:.||
  Fly   261 TVPVGRVETGLLKPGMVV---------------NFAPV---------------------NLVTEV 289

  Fly   417 ETEKKAHAVLKYREHESQQEKIESSSDEIRKKEEEHQAKYRAEREARR--LAGRFRMRGGQRVKQ 479
            ::.:..|               |:.::.:.........|..:.:|.||  :||            
  Fly   290 KSVEMHH---------------EALTEAMPGDNVGFNVKNVSVKELRRGYVAG------------ 327

  Fly   480 VDENEGKPR------VSVIIKGDVHGSVEAILDVLETYNSNESCRLDIV----HYGVGNVTEGDL 534
             |.....||      ..||:.............||:.:.::.:|:...:    ....|..||.:.
  Fly   328 -DSKNNPPRGAADFTAQVIVLNHPGQIANGYTPVLDCHTAHIACKFSEIKEKCDRRTGKTTETEP 391

  Fly   535 ELAKAFHAIIYAFAVETPQLKAAKEVNIRSYNIIYRLIDDLKEQLSSKLPPVEVEEVLGEANVLQ 599
            :..|:..|.|..       |..:|.:.:.|:               .:.||            |.
  Fly   392 KAIKSGDAAIIV-------LVPSKPLCVESF---------------QEFPP------------LG 422

  Fly   600 NFLINEGRKEVPVAGCRCTKGVLKKAQKFRLLRDGEV 636
            .|.:.:.|:.|.|       ||:|.. .|:....|:|
  Fly   423 RFAVRDMRQTVAV-------GVIKSV-NFKETTSGKV 451

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mIF2NP_651621.2 InfB 158..689 CDD:223606 115/557 (21%)
IF2_eIF5B 163..327 CDD:206674 57/210 (27%)
IF2_mtIF2_II 336..431 CDD:293903 19/117 (16%)
IF-2 482..575 CDD:288813 16/102 (16%)
mtIF2_IVc 593..680 CDD:293893 11/44 (25%)
eEF1alpha2NP_524611.1 PTZ00141 1..450 CDD:185474 113/554 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45464632
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.840

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