DRSC/TRiP Functional Genomics Resources

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Protein Alignment mIF2 and Dgp-1

DIOPT Version :10

Sequence 1:NP_651621.2 Gene:mIF2 / 43382 FlyBaseID:FBgn0039588 Length:696 Species:Drosophila melanogaster
Sequence 2:NP_611302.1 Gene:Dgp-1 / 37080 FlyBaseID:FBgn0027836 Length:669 Species:Drosophila melanogaster


Alignment Length:273 Identity:65/273 - (23%)
Similarity:105/273 - (38%) Gaps:72/273 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   165 VTVMGHVDHGKTTL--------LDSLRG----------ADVAAGEAGGITQHIGAF--------- 202
            |.|:|:||.||:||        ||:.||          .::.:|....:...|..|         
  Fly   146 VAVVGNVDAGKSTLLGVLTHGELDNGRGHARQRLFRHKHEIESGRTSSVGNDILGFDGVGNVVNK 210

  Fly   203 --------TVTLENGERV-TFLDTPGHAAFSAMRARGAV--ATDIIVLVVAAEDGVMAQTREVIQ 256
                    ....||..:| ||:|..||..:......|..  |.|..:|::.|..|::..|:|.:.
  Fly   211 PDHGHLDWVKICENSAKVITFIDLAGHERYLKTTVFGMTGHAPDFGMLMIGANAGIIGMTKEHLG 275

  Fly   257 LAKEAQVPIIVALNKIDKPEANIEKSKREL----------AQMGLALEEHGGDV----------- 300
            ||....||:.|.:.|||...||:.:...:|          .::.:.:..|...|           
  Fly   276 LALALAVPVFVVVTKIDMCPANVLQENMKLLFKMLKSQGCRKVPVVVRSHDDVVLSATNFVSERL 340

  Fly   301 -QVIPISALKGTNLELLAEAVSTQATLMGLKADPTGLVEGIVVESKTD-----PRRGKLSTAIVS 359
             .:..:|.:.|.|||||...::..:|.|     |..  |.:..|.:.|     |..|.:.:....
  Fly   341 CPIFQVSNVTGDNLELLKMFLNLLSTRM-----PGS--ESLPAEFQIDDVYAVPGVGTVVSGTCL 398

  Fly   360 RGTLRKGSVLLSG 372
            :||:|....|:.|
  Fly   399 QGTIRLNDCLMLG 411

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mIF2NP_651621.2 InfB 159..688 CDD:440298 65/273 (24%)
Dgp-1NP_611302.1 GTPBP1 55..556 CDD:444076 65/273 (24%)
dermokine <561..>651 CDD:455732
Blue background indicates that the domain is not in the aligned region.

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