DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1894 and SAMD1

DIOPT Version :9

Sequence 1:NP_651620.1 Gene:CG1894 / 43378 FlyBaseID:FBgn0039585 Length:421 Species:Drosophila melanogaster
Sequence 2:NP_612361.1 Gene:SAMD1 / 90378 HGNCID:17958 Length:538 Species:Homo sapiens


Alignment Length:88 Identity:21/88 - (23%)
Similarity:35/88 - (39%) Gaps:16/88 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 PLGDQDGISSKLPDIPRALQLTNAKESSATRGLGQSASKSEMGKSQLQNDSSLQKNIQETKTITG 79
            |.||:.|         ||....:|:.|.:.||    ..:..:.|.:.::|.  :...:|.....|
Human   298 PRGDRPG---------RAPPAASARPSRSKRG----GEERVLEKEEEEDDD--EDEDEEDDVSEG 347

  Fly    80 SCI-EAQRIGATPKKQLEGVKEP 101
            |.: |:.|.......||.|.:.|
Human   348 SEVPESDRPAGAQHHQLNGERGP 370

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1894NP_651620.1 NAT_SF 130..395 CDD:302625
MOZ_SAS 202..378 CDD:280097
SAMD1NP_612361.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..30
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 92..247
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 282..458 21/88 (24%)
SAM_Atherin-like 459..527 CDD:188982
SAM 459..525 CDD:197735
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5027
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.900

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