DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1894 and Samd1

DIOPT Version :9

Sequence 1:NP_651620.1 Gene:CG1894 / 43378 FlyBaseID:FBgn0039585 Length:421 Species:Drosophila melanogaster
Sequence 2:NP_001074884.1 Gene:Samd1 / 666704 MGIID:2142433 Length:519 Species:Mus musculus


Alignment Length:124 Identity:25/124 - (20%)
Similarity:42/124 - (33%) Gaps:41/124 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 LGDQDGISSKLPDIPRALQLTNAKESSATRGLGQSASKSEMGKSQLQNDSSLQKNIQETKTITGS 80
            ||...|.|.:|                 |||..|...:.|..:.:|                   
Mouse   239 LGGSGGASGRL-----------------TRGRVQGLLEEEAARGRL------------------- 267

  Fly    81 CIEAQRIG--ATPKKQLEGVKEPNMISLLHTNASSNVDDRQRQETIDNEKSDVQKEKED 137
              |..|:|  |.|:....| :.|...|.....:....::|..::..::|..|.::|:||
Mouse   268 --ERTRLGALALPRGDRPG-RAPPAASARAARSKRGGEERVFEKEEEDEDEDEEEEEED 323

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1894NP_651620.1 NAT_SF 130..395 CDD:302625 4/8 (50%)
MOZ_SAS 202..378 CDD:280097
Samd1NP_001074884.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..30
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 87..232
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 261..381 16/85 (19%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 417..439
SAM_Atherin-like 440..508 CDD:188982
SAM 440..506 CDD:197735
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5027
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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