DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1894 and lsy-12

DIOPT Version :9

Sequence 1:NP_651620.1 Gene:CG1894 / 43378 FlyBaseID:FBgn0039585 Length:421 Species:Drosophila melanogaster
Sequence 2:NP_001263849.1 Gene:lsy-12 / 3565873 WormBaseID:WBGene00045419 Length:1585 Species:Caenorhabditis elegans


Alignment Length:448 Identity:133/448 - (29%)
Similarity:214/448 - (47%) Gaps:69/448 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MDKENRSGDHLKYQPLGDQDGISSKLPDIPR------ALQLTNAKESSATRGLGQ---------- 49
            :|.||...|.:    |.:.....:|.|..||      |.:.||::.|:.|....:          
 Worm   372 LDSENSDNDEM----LSNDQSEIAKRPRTPRPRYSPEAQRRTNSRLSALTIDTNRSNDLNVDGSA 432

  Fly    50 --SASKSEMGKSQLQNDSSLQKNIQETKTITGSCIEAQRIGATPKKQLEGVKEP-------NMIS 105
              |:|.:..|.|....|    :..|:.:....|...:::| .||...|....||       :.::
 Worm   433 PSSSSAASCGLSTPDPD----RTSQQRRKGNQSAARSRKI-KTPSPPLSQEDEPMELDSDDDPVN 492

  Fly   106 LLHTNASSNVDD------RQRQETIDNEKSDVQKEKE-----------DAKVKVIRNIEKVQFGR 153
            .| .|....:||      ::.:|..:..|..|....|           .:|.:..|..|::.||.
 Worm   493 EL-DNLPIVIDDPSYVLTKEHKEIFEQVKKSVSDRNEFSPAQISEIYRSSKGEQARLPERIHFGA 556

  Fly   154 YEIETTSSSPYPV--INDKATTIYVCEFCLKYMCLRKSYSYHLYDCKKRCPPGSLLYRKDNIYIY 216
            :.::|...||:|.  ||.|  .:::||||..|....:....|...|..|.|||..:|||.:|.::
 Worm   557 FIMKTWYGSPFPAEFINVK--KLFICEFCFFYARSDEIMQNHAKKCMLRAPPGLEIYRKGDISVF 619

  Fly   217 EVDGHKEQLYCQCLCLMSKLFLENKKILYSSSSFLFYILCLKDKDGEHFAGYFAREKTMLNI-NL 280
            ||||..::.|||.|||:|::|||:|.:.|.:..|.|||:.:.|..|.||||||::||...:: ||
 Worm   620 EVDGRLQKEYCQTLCLVSRMFLESKTVFYDTEPFFFYIVTINDDIGCHFAGYFSKEKYEPDVNNL 684

  Fly   281 NCILVLPPYMRKGYGKLLIDLSYEISRREACIGGPKKPLSKVARLCYLSYWGHILLNLL-RHHSS 344
            :||:.||.|...|.|:.|||:||.:||:|...|||::|||::.|..|..||...:.:.| |....
 Worm   685 SCIMTLPCYQEMGLGRFLIDISYALSRKEKWFGGPEQPLSELGRKAYGGYWRTTIASCLGRLKDE 749

  Fly   345 PDL---VTIEELSKATGFREEDIISTLEFMGMTK--------YYKVDHIMFYTTSSII 391
            .:.   ::|:.::..||....||:..:..:|..|        :||::..:.:...|||
 Worm   750 LEFGSGISIKMIADDTGVNCHDILEVVCSLGWAKPVDPDEKNHYKLEWDVDWDMVSII 807

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1894NP_651620.1 NAT_SF 130..395 CDD:302625 100/288 (35%)
MOZ_SAS 202..378 CDD:280097 73/188 (39%)
lsy-12NP_001263849.1 NAT_SF 550..783 CDD:302625 90/234 (38%)
MOZ_SAS 605..786 CDD:280097 73/180 (41%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D629545at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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