DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1894 and mys-4

DIOPT Version :9

Sequence 1:NP_651620.1 Gene:CG1894 / 43378 FlyBaseID:FBgn0039585 Length:421 Species:Drosophila melanogaster
Sequence 2:NP_492265.1 Gene:mys-4 / 183194 WormBaseID:WBGene00007914 Length:617 Species:Caenorhabditis elegans


Alignment Length:462 Identity:129/462 - (27%)
Similarity:201/462 - (43%) Gaps:98/462 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 YQPLGDQD--------------------GISSKL-PDIPRALQLTNAKESSATRGLGQSASKSEM 56
            |.|.|:.|                    .||.:. |..|       .||....|  |.:|.|.|:
 Worm   178 YSPSGEFDSDWYCIACCRVKGIKIWHTTSISHRSHPSAP-------VKERKTKR--GGAARKDEL 233

  Fly    57 GKSQLQNDSSLQKNIQETKTITGSCIEAQRIGATPKKQLEGVKEPNMISLLHTNASSNVDDRQRQ 121
               :.:.|....|::...:.:|...:..: .|.:.||.|.           :|..||...::::|
 Worm   234 ---EFEGDIDELKDLLAKRDLTFEILNYE-AGFSSKKPLP-----------YTPTSSGKKNKKKQ 283

  Fly   122 ETIDNEKSDVQKEKEDAKVKVIRNIEKVQFGRYEI-ETTSSSPY---PVIN-------------- 168
                 :||.|::|.:.:..:...:..||.....|: :.|.|..|   |:.|              
 Worm   284 -----QKSPVREEFDYSNAERSPDFPKVVRADLELFKATKSEAYQQTPIFNPHPEGQFLHFGTGK 343

  Fly   169 --------------DKATTIYVCEFCLKYMCLRKSYSYHLYDCKKRCPPGSLLYRKDNIYIYEVD 219
                          ..:..:|.|:|||....|::....|...|..:.|||:.:||.|.:..:|||
 Worm   344 ACKAIYSSAYEEPLHSSAHLYACKFCLHTTNLKEDLIVHWDICNAKHPPGTEIYRNDGLAFFEVD 408

  Fly   220 GHKEQLYCQCLCLMSKLFLENKKILYSSSSFLFYILCLKDKDGEHFAGYFAREKT-MLNINLNCI 283
            |..::.|||.|||:||||:.:|.:.....:|.||:||....:|....|||::||. ..|.||:|:
 Worm   409 GAVQKKYCQDLCLISKLFIASKTLYDEVETFKFYVLCEITTEGYVIVGYFSKEKNPSKNNNLSCL 473

  Fly   284 LVLPPYMRKGYGKLLIDLSYEISRREACIGGPKKPLSKVARLCYLSYWGHILLNLLRHHSSPDLV 348
            ||||...:.|||:||||:|||:||.|..||.|:.|||.:..|.|..||...||..:|.|.:.|.:
 Worm   474 LVLPMVQKMGYGRLLIDMSYELSRLEMRIGHPEHPLSDLGILAYRGYWRSSLLCYIREHRNYDRL 538

  Fly   349 TIEELSKATGFREEDIISTLEFMGMTKYYKVDHIMFYTTSSIIEDRRGLAQFKKP-----RLTIH 408
            .|:::..||.....||::.|         .:|: |......:...:.|....|.|     |..:.
 Worm   539 NIKDMCLATRIAPVDIVNQL---------MLDN-MIVLKGGVYSIKIGKRALKFPLSQCRRRFVD 593

  Fly   409 RNRLSWK 415
            .::|.||
 Worm   594 PSQLFWK 600

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1894NP_651620.1 NAT_SF 130..395 CDD:302625 94/297 (32%)
MOZ_SAS 202..378 CDD:280097 74/176 (42%)
mys-4NP_492265.1 PLN00058 35..117 CDD:177689
PHD 92..144 CDD:214584
PHD 147..193 CDD:214584 4/14 (29%)
NAT_SF 347..603 CDD:302625 91/264 (34%)
MOZ_SAS 391..565 CDD:280097 76/183 (42%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5027
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D629545at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.820

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