DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1894 and mys-2

DIOPT Version :9

Sequence 1:NP_651620.1 Gene:CG1894 / 43378 FlyBaseID:FBgn0039585 Length:421 Species:Drosophila melanogaster
Sequence 2:NP_001309531.1 Gene:mys-2 / 173281 WormBaseID:WBGene00010537 Length:533 Species:Caenorhabditis elegans


Alignment Length:344 Identity:127/344 - (36%)
Similarity:190/344 - (55%) Gaps:47/344 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    88 GATPKKQLEGVKEPNMISLLHTNASSNVDDRQRQETIDNEKSDVQKEKEDAKVKVIRNIEKVQFG 152
            ||..:.|...::|       :::..::::|      :|...:.:::|.|: :.|| :||.::..|
 Worm   146 GALTRSQRRTLEE-------YSHLKTDLND------LDATTARLEREHEE-RTKV-KNIPQITIG 195

  Fly   153 RYEIETTSSSPYPVINDKATTIYVCEFCLKYMCLRKSYSYHLYDCKKRCPPGSLLYRKDNIYIYE 217
            .:||.....||:|. :.:...||:||:||.|....:.:..|:..||.|.|||:.:||||::.:||
 Worm   196 AHEILAWYYSPFPP-DCENLDIYMCEYCLLYTPHHERFKQHIDTCKVRQPPGNEIYRKDHLSVYE 259

  Fly   218 VDGHKEQLYCQCLCLMSKLFLENKKILYSSSSFLFYILCLKDKDGEHFAGYFAREKTMLNINLNC 282
            |||..::||||||||:||||:::|.:.:....|:||:||..|:.|.|..|||:||....| ||.|
 Worm   260 VDGSGQKLYCQCLCLLSKLFMDHKTLYFDVDDFMFYVLCETDEHGAHIVGYFSREVESAN-NLAC 323

  Fly   283 ILVLPPYMRKGYGKLLIDLSYEISRREACIGGPKKPLSKVARLCYLSYWGHILLNLLRHHSSPDL 347
            |:|.||:.:||||||||..|||:||||..||.|:||||.:.::.|.|||...|:.|...|.. ..
 Worm   324 IMVFPPFQKKGYGKLLIQFSYELSRREGYIGMPEKPLSDLGKVSYRSYWWWRLMKLFHIHQG-HT 387

  Fly   348 VTIEELSKATGFREEDIISTLEFMGMTKYYK-----------------VDHIMFYTTSSIIEDRR 395
            ||...||..:|...:||:|||..|.|.:.||                 |||.:.           
 Worm   388 VTATFLSNESGIAVDDIVSTLITMRMCRQYKEPEFIPGEWYVRIHRKIVDHCVM----------- 441

  Fly   396 GLAQFKKPRLTIHRNRLSW 414
             ....|.|||.:.|.::.|
 Worm   442 -CGYGKPPRLLLDRTKVRW 459

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1894NP_651620.1 NAT_SF 130..395 CDD:302625 115/281 (41%)
MOZ_SAS 202..378 CDD:280097 87/175 (50%)
mys-2NP_001309531.1 Tudor-knot 53..110 CDD:288553
NAT_SF 170..418 CDD:302625 111/252 (44%)
MOZ_SAS 244..418 CDD:280097 87/175 (50%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160158369
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5027
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S799
OMA 1 1.010 - - QHG51854
OrthoDB 1 1.010 - - D629545at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm14480
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10615
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
109.770

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