DRSC/TRiP Functional Genomics Resources

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Protein Alignment beat-VI and zgc:172120

DIOPT Version :9

Sequence 1:NP_001263035.1 Gene:beat-VI / 43377 FlyBaseID:FBgn0039584 Length:332 Species:Drosophila melanogaster
Sequence 2:NP_001121748.1 Gene:zgc:172120 / 799440 ZFINID:ZDB-GENE-080204-46 Length:273 Species:Danio rerio


Alignment Length:267 Identity:50/267 - (18%)
Similarity:90/267 - (33%) Gaps:69/267 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    37 LSWIIISELLLSAHCLKDLKIFVPE---AVLMGNAATLSCQY--DLEQAALYAVRW--------- 87
            :.|::   |......:...::..|:   ..|.|::|.|.|::  ||..:.| .|.|         
Zfish     1 MRWLV---LFFGGVLVAPFEVNAPDKHLLALRGHSAVLGCEFTPDLNLSNL-VVTWQREEDSQVV 61

  Fly    88 ---YFGQEEFYRYVPREAKPTFVFAVAGINVDLANSDATSVTLKGVTRELSGSYQCEVSEDAPLF 149
               |:.|::..|..|.....|.:|.     .:|...:| |:.:..|:.:.:|.|.|.||......
Zfish    62 HSFYYQQDQLERQSPEYHSRTSLFV-----TELHKGNA-SIRIAAVSWKDAGRYLCIVSNTKGTG 120

  Fly   150 HTEIRSAHMQVIELPKDDPVMQVDKKVIGVNDNFKAVC----TVGPSYPPANITWSINGNQIRRT 210
            ...:...:..:...|:           :.::.|..|:.    |.|  :|...:.|....:|....
Zfish   121 RASMEVTYGALYSEPR-----------LSIHLNSSALTVEFETEG--FPKPEVIWVDEHDQTLSC 172

  Fly   211 PLQRISQDTYEGSTTYSSLDIYPNSQALQGFFETKYQHSVNLQCV-VTIRHMYHKVVAQRIGLNA 274
            ||:.:....                   .|.:..|.::.|..|.| ||.....|     .:..|.
Zfish   173 PLELLKHTE-------------------DGLYLIKSRYEVKKQVVNVTFTLKNH-----LLNQNI 213

  Fly   275 APPTTIS 281
            ..|.|.|
Zfish   214 HRPVTFS 220

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
beat-VINP_001263035.1 Ig 66..142 CDD:416386 22/89 (25%)
Ig strand B 67..76 CDD:409353 3/10 (30%)
CDR1 76..83 CDD:409353 2/6 (33%)
Ig strand C 83..91 CDD:409353 3/19 (16%)
FR2 84..91 CDD:409353 3/18 (17%)
CDR2 94..108 CDD:409353 3/13 (23%)
Ig strand C' 94..99 CDD:409353 1/4 (25%)
Ig strand C' 102..104 CDD:409353 0/1 (0%)
FR3 109..143 CDD:409353 7/33 (21%)
Ig strand D 117..121 CDD:409353 1/3 (33%)
Ig strand E 123..127 CDD:409353 1/3 (33%)
Ig strand F 136..144 CDD:409353 4/7 (57%)
zgc:172120NP_001121748.1 IG_like 23..127 CDD:214653 25/110 (23%)
Ig 30..126 CDD:299845 24/102 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
00.000

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