DRSC/TRiP Functional Genomics Resources

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Protein Alignment beat-VI and si:dkey-71p21.13

DIOPT Version :9

Sequence 1:NP_001263035.1 Gene:beat-VI / 43377 FlyBaseID:FBgn0039584 Length:332 Species:Drosophila melanogaster
Sequence 2:XP_001339740.3 Gene:si:dkey-71p21.13 / 799376 ZFINID:ZDB-GENE-090313-327 Length:252 Species:Danio rerio


Alignment Length:327 Identity:56/327 - (17%)
Similarity:108/327 - (33%) Gaps:105/327 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 LHTAFNMLALSWIIISELLLSAHCLKDLKIFVPEAVLM---GNAATLSCQY----DLEQAALY-- 83
            ||..|.:||.|   .:..::||          |...::   |..|.|.|.:    ||...::.  
Zfish     2 LHLLFCILAKS---AASFIVSA----------PNNAVIAVRGRPAVLGCYFMPDPDLSSLSIVWQ 53

  Fly    84 ------AVRWYFGQEEFYRYVPREAKPTFVFAVAGINVDLANSDATSVTLKGVTRELSGSYQCEV 142
                  .|..::.:|..     :|.:.....:...:.:...|....|:.:.||..:..|.|.|:|
Zfish    54 RMEDSRLVHVFYDEENL-----QEQQSAEYHSRTSLYISELNKGNASLRIDGVGLKDEGWYVCKV 113

  Fly   143 SE-----------DAPLFHTEIRSAHMQVIELPKDDPVMQVDKKVIGVNDNFKAVCTVGPSYPPA 196
            ..           |...|::|.|      :.:..:...::|..:..|              :|..
Zfish   114 RNKKGAGKVKIKLDYGAFYSEPR------LSIHANSSSVRVQYETEG--------------FPKP 158

  Fly   197 NITWSINGNQIRRTPLQRISQDTYEGSTTYSSLDIYPNSQALQGFFETKYQHSVNLQCVVTIRHM 261
            .:.|                ||.:..|.:: .|::..:::.  |.:..|..:......|.....:
Zfish   159 EVIW----------------QDEHNQSLSH-HLELLDHTEV--GLYLVKSSYEAQTPVVKVTFIL 204

  Fly   262 YHKVVAQRIGLNAAPPTTISPNLLGLEGSKRYANGDPDNS--ALTGASQRCCICCGAFGAVSLAI 324
            .:.::.|:                 |:.|..|..||.::.  |:...|..|.|..|..||:   :
Zfish   205 KNHLLNQK-----------------LQKSVIYIPGDTEDGSIAVILLSLACIILSGLMGAL---L 249

  Fly   325 FT 326
            ||
Zfish   250 FT 251

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
beat-VINP_001263035.1 Ig 66..142 CDD:416386 16/87 (18%)
Ig strand B 67..76 CDD:409353 3/12 (25%)
CDR1 76..83 CDD:409353 2/6 (33%)
Ig strand C 83..91 CDD:409353 1/15 (7%)
FR2 84..91 CDD:409353 1/6 (17%)
CDR2 94..108 CDD:409353 1/13 (8%)
Ig strand C' 94..99 CDD:409353 0/4 (0%)
Ig strand C' 102..104 CDD:409353 0/1 (0%)
FR3 109..143 CDD:409353 7/33 (21%)
Ig strand D 117..121 CDD:409353 1/3 (33%)
Ig strand E 123..127 CDD:409353 1/3 (33%)
Ig strand F 136..144 CDD:409353 4/7 (57%)
si:dkey-71p21.13XP_001339740.3 I-set 17..126 CDD:254352 20/123 (16%)
Ig 30..115 CDD:299845 17/89 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
00.000

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