DRSC/TRiP Functional Genomics Resources

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Protein Alignment beat-VI and LOC797620

DIOPT Version :9

Sequence 1:NP_001263035.1 Gene:beat-VI / 43377 FlyBaseID:FBgn0039584 Length:332 Species:Drosophila melanogaster
Sequence 2:XP_001338090.3 Gene:LOC797620 / 797620 -ID:- Length:268 Species:Danio rerio


Alignment Length:205 Identity:39/205 - (19%)
Similarity:74/205 - (36%) Gaps:45/205 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    37 LSWIIISELLLSAHCLKDLKIFVPE---AVLMGNAATLSCQYDLE-QAALYAVRW---------- 87
            |.|.::       .|.....:.||.   ..:.|..|.|||.::.: ..:...:.|          
Zfish     6 LLWTLL-------QCADLFSVNVPSYPVLAVRGATALLSCFFESDSNPSSLVITWQRVEDMRVVH 63

  Fly    88 -YFGQEEFYRYVPREAKPTFVFAVAGINVDLANSDATSVTLKGVTRELSGSYQCEVSEDAPLFHT 151
             |:.|::   .:.|::...|.......|.....:.:.|:...|:  :.:|.|:|.||        
Zfish    64 SYYHQKD---QLKRQSADYFNRTHLNYNETAKGNASLSIASFGL--KDAGIYECVVS-------- 115

  Fly   152 EIRSAHMQVIEL----PKDDPVMQVDKKVIGVNDNFKAVCTVGPSYPPANITWSINGNQIRRTPL 212
            ..:......::|    |..:|.:.:..|...|...::   |.|  :|...:.|..:|.| ..|..
Zfish   116 NTKGTDKGTLQLIYAAPYSEPRLSIHLKSSNVTVQYE---TEG--FPKPEVLWLNSGGQ-NLTNH 174

  Fly   213 QRISQDTYEG 222
            |.:|..:.||
Zfish   175 QEVSNTSDEG 184

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
beat-VINP_001263035.1 Ig 66..142 CDD:416386 16/87 (18%)
Ig strand B 67..76 CDD:409353 4/8 (50%)
CDR1 76..83 CDD:409353 0/7 (0%)
Ig strand C 83..91 CDD:409353 2/18 (11%)
FR2 84..91 CDD:409353 2/17 (12%)
CDR2 94..108 CDD:409353 2/13 (15%)
Ig strand C' 94..99 CDD:409353 0/4 (0%)
Ig strand C' 102..104 CDD:409353 0/1 (0%)
FR3 109..143 CDD:409353 6/33 (18%)
Ig strand D 117..121 CDD:409353 0/3 (0%)
Ig strand E 123..127 CDD:409353 1/3 (33%)
Ig strand F 136..144 CDD:409353 4/7 (57%)
LOC797620XP_001338090.3 Ig 36..119 CDD:325142 16/95 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
00.000

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