DRSC/TRiP Functional Genomics Resources

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Protein Alignment beat-VI and cd276

DIOPT Version :9

Sequence 1:NP_001263035.1 Gene:beat-VI / 43377 FlyBaseID:FBgn0039584 Length:332 Species:Drosophila melanogaster
Sequence 2:NP_001074091.2 Gene:cd276 / 791140 ZFINID:ZDB-GENE-070112-452 Length:300 Species:Danio rerio


Alignment Length:256 Identity:54/256 - (21%)
Similarity:95/256 - (37%) Gaps:73/256 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 MLALSWIIISELLLSAHCLKDLKIFVPEA---VLMGNAATLSCQ------YDLEQAALYAVRW-- 87
            ||||  ::.|.|:|.:|.| |::  |||:   ||.|:.|.|:|.      ::|...:::   |  
Zfish     1 MLAL--LLFSLLVLQSHAL-DVR--VPESPVVVLFGSDALLNCSFSGVSAFNLSDVSVF---WQL 57

  Fly    88 ----------YFGQEEFYRYVPREAKPTFVFAVAGINVDLANSDATSVTLKGVTRELSGSYQCEV 142
                      :..|::......|.:..|.:|:      |.......|:.::.|.....|:|.|.|
Zfish    58 SDTKRSVHSFWKSQDQLTDQDERFSGRTTLFS------DQLMVGNASLRIRKVRVADEGTYSCFV 116

  Fly   143 SEDAPLFHTEIRS----AHMQVIELPKDDPVMQVDK-KVIGVNDNFKAVCTVGPSYPPANITWSI 202
                     .::|    |.:..:..|...|::..|. ..:...|.....|.....:|.|.:.|. 
Zfish   117 ---------RVQSYGSAAVIMQVAAPFSKPLVSWDSDSSLKPGDAVSLSCVAYGGFPQAQLQWQ- 171

  Fly   203 NGNQIRRTPLQRISQDTYEGSTTYSSLDIYPNSQALQGFFETKYQHSVNLQ------CVVT 257
            :|:....|....:||...|                 :|.|..:...||:|:      |.:|
Zfish   172 DGSGHNLTENITVSQLANE-----------------EGLFSVRSVLSVHLEPNSTYSCRIT 215

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
beat-VINP_001263035.1 Ig 66..142 CDD:416386 16/93 (17%)
Ig strand B 67..76 CDD:409353 3/14 (21%)
CDR1 76..83 CDD:409353 1/6 (17%)
Ig strand C 83..91 CDD:409353 1/19 (5%)
FR2 84..91 CDD:409353 1/18 (6%)
CDR2 94..108 CDD:409353 2/13 (15%)
Ig strand C' 94..99 CDD:409353 0/4 (0%)
Ig strand C' 102..104 CDD:409353 0/1 (0%)
FR3 109..143 CDD:409353 6/33 (18%)
Ig strand D 117..121 CDD:409353 0/3 (0%)
Ig strand E 123..127 CDD:409353 1/3 (33%)
Ig strand F 136..144 CDD:409353 4/7 (57%)
cd276NP_001074091.2 Ig 36..117 CDD:325142 15/98 (15%)
Ig 97..219 CDD:325142 28/146 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
00.000

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