DRSC/TRiP Functional Genomics Resources

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Protein Alignment beat-VI and F11R

DIOPT Version :9

Sequence 1:NP_001263035.1 Gene:beat-VI / 43377 FlyBaseID:FBgn0039584 Length:332 Species:Drosophila melanogaster
Sequence 2:NP_001369656.1 Gene:F11R / 50848 HGNCID:14685 Length:327 Species:Homo sapiens


Alignment Length:229 Identity:52/229 - (22%)
Similarity:90/229 - (39%) Gaps:28/229 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    40 IIISELLLSAHCL--KDLKIFVPEAVLMGNAATLSCQYDLEQAALYAVRWYFGQEEFYRYVPREA 102
            |::..|.|.:..:  .:.::.:||    .|...|||.|....:.  .|.|.|.|.:..|.|....
Human    19 ILLCSLALGSVTVHSSEPEVRIPE----NNPVKLSCAYSGFSSP--RVEWKFDQGDTTRLVCYNN 77

  Fly   103 KPTFVFAVAGINVDLANSDATSVTLKGVTRELSGSYQCEVSEDAPLFHTEIRSAHMQVIELPKDD 167
            |.|..:.      |......|.:|.|.||||.:|:|.|.|||:....:.|::.  ..::.:|...
Human    78 KITASYE------DRVTFLPTGITFKSVTREDTGTYTCMVSEEGGNSYGEVKV--KLIVLVPPSK 134

  Fly   168 PVMQVDKKVIGVNDNFKAVCTVGPSYPPANITWSINGNQIRRTP--LQRISQDTYEGSTTYSSLD 230
            |.:.:..... :.:.....|:.....||:..||..:|..:...|  .:..|..:|..:.|...|.
Human   135 PTVNIPSSAT-IGNRAVLTCSEQDGSPPSEYTWFKDGIVMPTNPKSTRAFSNSSYVLNPTTGELV 198

  Fly   231 IYPNS---------QALQGFFETKYQHSVNLQCV 255
            ..|.|         :|..|:......::|.::.|
Human   199 FDPLSASDTGEYSCEARNGYGTPMTSNAVRMEAV 232

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
beat-VINP_001263035.1 Ig 66..142 CDD:416386 24/75 (32%)
Ig strand B 67..76 CDD:409353 4/8 (50%)
CDR1 76..83 CDD:409353 0/6 (0%)
Ig strand C 83..91 CDD:409353 3/7 (43%)
FR2 84..91 CDD:409353 3/6 (50%)
CDR2 94..108 CDD:409353 4/13 (31%)
Ig strand C' 94..99 CDD:409353 1/4 (25%)
Ig strand C' 102..104 CDD:409353 0/1 (0%)
FR3 109..143 CDD:409353 11/33 (33%)
Ig strand D 117..121 CDD:409353 0/3 (0%)
Ig strand E 123..127 CDD:409353 1/3 (33%)
Ig strand F 136..144 CDD:409353 4/7 (57%)
F11RNP_001369656.1 IgV_1_JAM1-like 30..129 CDD:409538 30/112 (27%)
Ig strand B 46..50 CDD:409538 1/3 (33%)
Ig strand C 59..63 CDD:409538 1/3 (33%)
Ig strand E 92..96 CDD:409538 1/3 (33%)
Ig strand F 106..111 CDD:409538 2/4 (50%)
Ig strand G 121..124 CDD:409538 1/2 (50%)
IgI_2_JAM1 135..231 CDD:409542 17/96 (18%)
Ig strand B 149..153 CDD:409542 0/3 (0%)
Ig strand C 163..167 CDD:409542 1/3 (33%)
Ig strand E 195..199 CDD:409542 1/3 (33%)
Ig strand F 209..214 CDD:409542 0/4 (0%)
Ig strand G 224..227 CDD:409542 0/2 (0%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

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