DRSC/TRiP Functional Genomics Resources

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Protein Alignment beat-VI and beat-IV

DIOPT Version :9

Sequence 1:NP_001263035.1 Gene:beat-VI / 43377 FlyBaseID:FBgn0039584 Length:332 Species:Drosophila melanogaster
Sequence 2:NP_001262876.1 Gene:beat-IV / 42778 FlyBaseID:FBgn0039089 Length:446 Species:Drosophila melanogaster


Alignment Length:203 Identity:61/203 - (30%)
Similarity:102/203 - (50%) Gaps:15/203 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    78 EQAALYAVRWYFGQEEFYRYVPREAKPTFVFAVAGINVDLANSDATSVTLKGVTRELSGSYQCEV 142
            |..||||::||...||||||||:...|...:.|.|:.|....|||:.|.|:|:|...:|.|:|||
  Fly   207 EGEALYAIKWYKDNEEFYRYVPKARPPKTSYRVDGVRVIEELSDASRVLLRGLTLNSTGLYRCEV 271

  Fly   143 SEDAPLFHTEIRSAHMQVIELPKDDPVMQVDKKVIGVNDNFKAVCTVGPSYPPANITWSINGNQI 207
            |.:||.|.:......|.::.||:|.|.::..:....:.:.....||.|.|:|.:::.|.:|...|
  Fly   272 SAEAPNFSSVQGEGRMDIVFLPRDGPHIRGQQYQYQIGEYLYLNCTSGKSHPASHLQWFVNEQPI 336

  Fly   208 -RRTPLQRISQDTYEGSTTYSSLDIYPNSQALQGFFETKYQH--SVNLQCVVTIRHMYHK----- 264
             ....|.:.:...::.....|:|       .||...|.::.|  .:.::|:.:|..:..|     
  Fly   337 LDEHYLHKYNDIVHKHGLITSTL-------GLQLPLEPRHFHEGDMRVKCLASISPVLWKGGKES 394

  Fly   265 VVAQRIGL 272
            |:.:|.|:
  Fly   395 VLQRRPGI 402

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
beat-VINP_001263035.1 Ig 66..142 CDD:416386 29/63 (46%)
Ig strand B 67..76 CDD:409353
CDR1 76..83 CDD:409353 2/4 (50%)
Ig strand C 83..91 CDD:409353 4/7 (57%)
FR2 84..91 CDD:409353 3/6 (50%)
CDR2 94..108 CDD:409353 7/13 (54%)
Ig strand C' 94..99 CDD:409353 4/4 (100%)
Ig strand C' 102..104 CDD:409353 0/1 (0%)
FR3 109..143 CDD:409353 14/33 (42%)
Ig strand D 117..121 CDD:409353 0/3 (0%)
Ig strand E 123..127 CDD:409353 1/3 (33%)
Ig strand F 136..144 CDD:409353 5/7 (71%)
beat-IVNP_001262876.1 Ig <212..285 CDD:299845 32/72 (44%)
Ig 314..>362 CDD:299845 11/54 (20%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000798
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR21261
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
33.010

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