DRSC/TRiP Functional Genomics Resources

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Protein Alignment beat-VI and beat-IIa

DIOPT Version :9

Sequence 1:NP_001263035.1 Gene:beat-VI / 43377 FlyBaseID:FBgn0039584 Length:332 Species:Drosophila melanogaster
Sequence 2:NP_001287375.1 Gene:beat-IIa / 42086 FlyBaseID:FBgn0038498 Length:431 Species:Drosophila melanogaster


Alignment Length:303 Identity:94/303 - (31%)
Similarity:137/303 - (45%) Gaps:34/303 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MASQRIRSRPEEGRKGRRMSSACRPGALHTAFNMLALSWIIISELLLSAHCLKDLKIFV-PEAVL 64
            |..||.........:..|.|. ||   ...|..:|.|..:::..:.|....|:::.:.: |.||.
  Fly    21 MGHQRATDTGHRQIRSHRKSD-CR---TFPARCLLLLLGVLLLSMELVECALRNVNLIIEPPAVR 81

  Fly    65 MGNAATLSCQYDLEQAALYAVRWYFGQEEFYRYVPREAKPTFVFAVAGINVDLANSDATSVTLKG 129
            .|....|.|.|||:.|.||:.::|.||.|||||.|.|...|.||...||:||:::|:||.|.|:.
  Fly    82 RGQHVVLRCMYDLDGAPLYSAKFYRGQLEFYRYTPGEFPNTKVFPFPGIHVDVSSSNATQVLLRN 146

  Fly   130 VTRELSGSYQCEVSEDAPLFHTEIRSAHMQVIELPKDDPVMQVDKKVIGVNDNFKAVCTVGPSYP 194
            |...|||::.|||:.|||||.|......|||:|||:..|.:..:.......|..:|.|:..||.|
  Fly   147 VGFGLSGNFSCEVTADAPLFSTATAVDTMQVVELPEKRPQVFTEHTRYEPGDVLRANCSTPPSRP 211

  Fly   195 PANITWSINGNQIRRTPLQ-----------RISQDTYEGSTTYSSLD--IYPNSQALQGFFETKY 246
            .|.:|::||...|.....:           |||.........:||::  ||.|...|    .:.|
  Fly   212 RAELTFTINNMVITHVDTEYIRTIDNLIATRISLKMQLQGIHFSSVNPAIYNNVYGL----NSVY 272

  Fly   247 QH------------SVNLQCVVTIRHMYHKVVAQRIGLNAAPP 277
            .|            .:.|:|...|..:|.:.....:|.....|
  Fly   273 GHGGPVYAPNSNPGGLLLRCSAQIGDLYQEYKEIELGTPQKDP 315

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
beat-VINP_001263035.1 Ig 66..142 CDD:416386 36/75 (48%)
Ig strand B 67..76 CDD:409353 2/8 (25%)
CDR1 76..83 CDD:409353 3/6 (50%)
Ig strand C 83..91 CDD:409353 2/7 (29%)
FR2 84..91 CDD:409353 1/6 (17%)
CDR2 94..108 CDD:409353 7/13 (54%)
Ig strand C' 94..99 CDD:409353 4/4 (100%)
Ig strand C' 102..104 CDD:409353 0/1 (0%)
FR3 109..143 CDD:409353 15/33 (45%)
Ig strand D 117..121 CDD:409353 0/3 (0%)
Ig strand E 123..127 CDD:409353 2/3 (67%)
Ig strand F 136..144 CDD:409353 4/7 (57%)
beat-IIaNP_001287375.1 PTZ00491 <209..>261 CDD:240439 12/51 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000798
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR21261
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
33.010

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