DRSC/TRiP Functional Genomics Resources

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Protein Alignment beat-VI and beat-Va

DIOPT Version :9

Sequence 1:NP_001263035.1 Gene:beat-VI / 43377 FlyBaseID:FBgn0039584 Length:332 Species:Drosophila melanogaster
Sequence 2:NP_001189214.1 Gene:beat-Va / 41578 FlyBaseID:FBgn0038087 Length:300 Species:Drosophila melanogaster


Alignment Length:313 Identity:90/313 - (28%)
Similarity:142/313 - (45%) Gaps:43/313 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    39 WI--IISELLLS---AHCLKDLKIFVPEAVLMGNAATLSCQYDLEQAALYAVRWYFGQEEFYRYV 98
            |:  :...||:.   |:.|....|.|||.|...:..||||.||:....|.:|:||...|||:||.
  Fly     5 WLMFLFIALLIDYPIAYALFVTDISVPEIVDFRDNVTLSCSYDMRGHTLNSVKWYKDHEEFFRYS 69

  Fly    99 PREAKPTFVFAVAGINV----DLANSDATSVTLKGVTRELSGSYQCEVSEDAPLFHTEIRSAHMQ 159
            |..:.....|.|||:.|    .:.|..:..:.|.....:.:|.|:||||.|||.|....::.:|.
  Fly    70 PLTSPIYMTFDVAGLQVLEGKYVCNESSCRLDLSLQGAKSTGLYKCEVSGDAPHFKLADKADNMT 134

  Fly   160 VIELPKDDPVMQVDKKVIGVNDNFKAVCTVGPSYPPANITWSINGNQIRRTPLQRISQDTYEGST 224
            |..||::||:::....:..:.:..||.|....|..|..:||.|||.|    ||......|.:  |
  Fly   135 VAALPQNDPLIESFNSMYRMEEYLKATCISDFSSLPTRLTWYINGEQ----PLLGELYPTTD--T 193

  Fly   225 TYSSLDIYPNSQALQGFFETKYQH------SVNLQCVVTIRHMYHKVVAQRIGLNAAPPTTISPN 283
            :.::.|.....|.||..|..:.|.      .:.|:||..|.: |.::..::         |:|.:
  Fly   194 SLAAHDYVLRRQRLQVQFFLQGQRFFQAGKILELKCVAEIEN-YPELRREK---------TLSAS 248

  Fly   284 LLGLEGSK-----RYANGDPDNSALTGASQRCCICCGAFGAVSLAIFTLAMAH 331
            |...:...     |:||      |.:|::|| .|.||....:|..:..:.:.|
  Fly   249 LSQYDNFNNQMPLRHAN------ANSGSAQR-SILCGRTSLISAFLAAILLIH 294

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
beat-VINP_001263035.1 Ig 66..142 CDD:416386 26/79 (33%)
Ig strand B 67..76 CDD:409353 4/8 (50%)
CDR1 76..83 CDD:409353 1/6 (17%)
Ig strand C 83..91 CDD:409353 3/7 (43%)
FR2 84..91 CDD:409353 3/6 (50%)
CDR2 94..108 CDD:409353 4/13 (31%)
Ig strand C' 94..99 CDD:409353 3/4 (75%)
Ig strand C' 102..104 CDD:409353 0/1 (0%)
FR3 109..143 CDD:409353 10/37 (27%)
Ig strand D 117..121 CDD:409353 1/3 (33%)
Ig strand E 123..127 CDD:409353 0/3 (0%)
Ig strand F 136..144 CDD:409353 5/7 (71%)
beat-VaNP_001189214.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR21261
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.010

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