DRSC/TRiP Functional Genomics Resources

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Protein Alignment beat-VI and CG5597

DIOPT Version :9

Sequence 1:NP_001263035.1 Gene:beat-VI / 43377 FlyBaseID:FBgn0039584 Length:332 Species:Drosophila melanogaster
Sequence 2:NP_611841.1 Gene:CG5597 / 37789 FlyBaseID:FBgn0034920 Length:260 Species:Drosophila melanogaster


Alignment Length:200 Identity:48/200 - (24%)
Similarity:85/200 - (42%) Gaps:39/200 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    71 LSCQYDLEQAALY-AVRWYFGQEEFYRYV---PREAKPTFVFAVAGINVDLANSDAT-------S 124
            |.|.|::|::..: .|:||...:..|:::   |..|.|.|     ...:|.....:|       |
  Fly    44 LDCDYEVEESPKFITVKWYRDDKSIYQWIFGTPPYAIPEF-----RNEIDSTYESSTEPSKQYSS 103

  Fly   125 VTLKGVTRELSGSYQCEVSEDAPLFHTEIRSAHMQVIELPKDDPVMQVDKKVIGVNDNFKAVCTV 189
            :.|...|...:|.|:|.|......|.:..|   :|||:|  .:..:::..|.|  ::..:..|||
  Fly   104 LALINPTIATTGDYKCVVQTSLNTFSSHQR---VQVIDL--RNYTLELSHKTI--HNETQLNCTV 161

  Fly   190 GPSYPPANITWSING-NQIRRTPLQRISQDTY-EGSTTYSSLDIYPNSQALQGFFETKYQHSVNL 252
            ...||...||...|. :.::|.|:...:::.| :||...::.|...:..|              .
  Fly   162 TNVYPRPTITIISNDMDVVKREPMVYENEEGYFDGSAVVAAYDTDDDPDA--------------Y 212

  Fly   253 QCVVT 257
            ||||:
  Fly   213 QCVVS 217

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
beat-VINP_001263035.1 Ig 66..142 CDD:416386 20/81 (25%)
Ig strand B 67..76 CDD:409353 2/4 (50%)
CDR1 76..83 CDD:409353 1/6 (17%)
Ig strand C 83..91 CDD:409353 3/8 (38%)
FR2 84..91 CDD:409353 3/6 (50%)
CDR2 94..108 CDD:409353 5/16 (31%)
Ig strand C' 94..99 CDD:409353 1/7 (14%)
Ig strand C' 102..104 CDD:409353 1/1 (100%)
FR3 109..143 CDD:409353 8/40 (20%)
Ig strand D 117..121 CDD:409353 0/3 (0%)
Ig strand E 123..127 CDD:409353 2/10 (20%)
Ig strand F 136..144 CDD:409353 4/7 (57%)
CG5597NP_611841.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR21261
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.010

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