DRSC/TRiP Functional Genomics Resources

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Protein Alignment Or98b and Or56a

DIOPT Version :10

Sequence 1:NP_524540.4 Gene:Or98b / 43375 FlyBaseID:FBgn0039582 Length:383 Species:Drosophila melanogaster
Sequence 2:NP_523796.2 Gene:Or56a / 37269 FlyBaseID:FBgn0034473 Length:419 Species:Drosophila melanogaster


Alignment Length:454 Identity:98/454 - (21%)
Similarity:161/454 - (35%) Gaps:112/454 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MLTDKFLRLQSALFR--LLGLELLHEQDVGH------RYPWRSI--CCILSVASFMPLTIAFGLQ 55
            |...|.|.|....|.  :.|..|.:.|..|:      ..|..|:  |.||:.:.:  |:.|..|.
  Fly     1 MFKVKDLLLSPTTFEDPIFGTHLRYFQWYGYVASKDQNRPLLSLIRCTILTASIW--LSCALMLA 63

  Fly    56 NV-QNVEQLTDSLCSVLVDLLALCKIGLFLWLYKDFKFLIGQFYCVLQTE--------THTAVAE 111
            .| :..|.|.|...|             :....:.|...|..|...:|.:        .|:.:..
  Fly    64 RVFRGYENLNDGATS-------------YATAVQYFAVSIAMFNAYVQRDKVISLLRVAHSDIQN 115

  Fly   112 MIVTRESRRDQFISAMYAYC----------FITAGLSA---C----LMSPLSML-ISYQRTGELQ 158
            ::...::|..:.:.|..||.          .:.|||.|   |    |..|.|:. :...|.||..
  Fly   116 LMHEADNREMELLVATQAYTRTITLLIWIPSVIAGLMAYSDCIYRSLFLPKSVFNVPAVRRGEEH 180

  Fly   159 PKFPFPSVYPWDNMKLSNYIISYF--WNVCAALGVALPTVCV-DTLFCSLSHNLCALFQIARHKM 220
            |...| .::|:..: ..|:::.|.  |   .|||:.:..:.: .|....|...:....||...::
  Fly   181 PILLF-QLFPFGEL-CDNFVVGYLGPW---YALGLGITAIPLWHTFITCLMKYVNLKLQILNKRV 240

  Fly   221 MHFE----------GRNT----------------KETHENLKHVFQL-YALCLNLGHFLNEYFRP 258
            ...:          ||.|                ||.....|.|.:| |.:|:           |
  Fly   241 EEMDITRLNSKLVIGRLTASELTFWQMQLFKEFVKEQLRIRKFVQELQYLICV-----------P 294

  Fly   259 LICQFVAASLHLCVLCYQLSANILQPALL---FYAAFTAAVVGQVSIYCFCGSSI---HSECQLF 317
            ::..|:..|:.:|.|.:.|:..:  |:.:   |...:...:.|.:.||.:..:.|   |.|..| 
  Fly   295 VMADFIIFSVLICFLFFALTVGV--PSKMDYFFMFIYLFVMAGILWIYHWHATLIVECHDELSL- 356

  Fly   318 GQAIYESSWPHLLQENLQLVSSLKIAMMRSSLGCPIDGYFFEANRETLITIVRTAISYVTLLRS 381
              |.:...|.:.   .:.|...|...||.:.....:.....:.|..|.|.|.|.|.||..||||
  Fly   357 --AYFSCGWYNF---EMPLQKMLVFMMMHAQRPMKMRALLVDLNLRTFIDIGRGAYSYFNLLRS 415

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Or98bNP_524540.4 7tm_6 59..372 CDD:251636 73/374 (20%)
Or56aNP_523796.2 7tm_6 126..407 CDD:251636 63/304 (21%)

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