DRSC/TRiP Functional Genomics Resources

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Protein Alignment Or98b and Or1a

DIOPT Version :9

Sequence 1:NP_524540.4 Gene:Or98b / 43375 FlyBaseID:FBgn0039582 Length:383 Species:Drosophila melanogaster
Sequence 2:NP_525029.2 Gene:Or1a / 30978 FlyBaseID:FBgn0029521 Length:392 Species:Drosophila melanogaster


Alignment Length:404 Identity:100/404 - (24%)
Similarity:177/404 - (43%) Gaps:64/404 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 QSALFRLLGLELLHEQDVGHRYPWRSICCILSV-ASFMPLTI-AFGLQNVQNVEQLTDSLCSVLV 72
            |...|..:||:|..::. |:......:.||:.: .||...|: ||.:||...:...:::|...|.
  Fly    15 QRFTFARMGLDLQPDKK-GNVLRSPLLYCIMCLTTSFELCTVCAFMVQNRNQIVLCSEALMHGLQ 78

  Fly    73 DLLALCKIGLFLWLYKDFKFLIGQFYCVLQTETHTAVAEMIVTR---ESRRDQFISAMYAYCFIT 134
            .:.:|.|:.:||....|...||.|.......|      :::.|.   :::|.|.::|:  |..:.
  Fly    79 MVSSLLKMAIFLAKSHDLVDLIQQIQSPFTEE------DLVGTEWRSQNQRGQLMAAI--YFMMC 135

  Fly   135 AGLS-ACLMSPLSM-LISYQRTGELQPKFPFPSVYPWD---------NMKLSNYIISYFWNVCAA 188
            ||.| :.|:.|::: ::.|..|||..|...|..:.|:|         :..|..:::|:|  .|:.
  Fly   136 AGTSVSFLLMPVALTMLKYHSTGEFAPVSSFRVLLPYDVTQPHVYAMDCCLMVFVLSFF--CCST 198

  Fly   189 LGVALPTVCVDTLFCSLSHNLCALFQIARHKMMHFEGR------NTKETHENLKHVFQLYALCLN 247
            .|       ||||:     ..|||....:::.:..:.:      |...:...|..:|..:|..|.
  Fly   199 TG-------VDTLY-----GWCALGVSLQYRRLGQQLKRIPSCFNPSRSDFGLSGIFVEHARLLK 251

  Fly   248 LGHFLNEYFRP-------LICQFVAASLHLCVLCYQLSANILQPALLFYAAFTAAVVGQVSIYCF 305
            :....|..|..       :||     .|:..|:|..:..:..| ...|...|:..|..|:.||.|
  Fly   252 IVQHFNYSFMEIAFVEVVIIC-----GLYCSVICQYIMPHTNQ-NFAFLGFFSLVVTTQLCIYLF 310

  Fly   306 CGSSIHSECQLFGQAIYE-SSWPHLLQENLQL-VSSLKIAMMRSSLGCPIDGYFFEANRETLITI 368
            ....:..|.:.|.:.:|| ..|.:|..::.:| :..::.|...:.||    .||||..|..|:.|
  Fly   311 GAEQVRLEAERFSRLLYEVIPWQNLPPKHRKLFLFPIERAQRETVLG----AYFFELGRPLLVWI 371

  Fly   369 VRTAISYVTLLRSL 382
            .|||.|:.||:.:|
  Fly   372 FRTAGSFTTLMNAL 385

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Or98bNP_524540.4 7tm_6 59..372 CDD:251636 79/341 (23%)
Or1aNP_525029.2 7tm_6 79..376 CDD:251636 78/328 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 1 1.000 - - H62715
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0009998
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR21137
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
44.010

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