DRSC/TRiP Functional Genomics Resources

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Protein Alignment Moca-cyp and PUB49

DIOPT Version :10

Sequence 1:NP_733246.1 Gene:Moca-cyp / 43374 FlyBaseID:FBgn0039581 Length:970 Species:Drosophila melanogaster
Sequence 2:NP_201554.1 Gene:PUB49 / 836889 AraportID:AT5G67530 Length:595 Species:Arabidopsis thaliana


Alignment Length:229 Identity:85/229 - (37%)
Similarity:116/229 - (50%) Gaps:31/229 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 GRIVFELFNDVAPKTAENFRALCTGEKGFGLITGKKLQYKGVIFHRVVKDFMVQAGDFSAGNGTG 91
            |.:..||..|:||:..|||..||  |:|:         |.||.|||.:::||:|.|| ..|.|.|
plant   353 GDLNIELHCDIAPRACENFITLC--ERGY---------YNGVAFHRSIRNFMIQGGD-PTGTGKG 405

  Fly    92 GESIYGGTFEDESFEK-KHDRPFLLSMANRGKNTNGSQFFITTQPAPHLDNIHVVFGQVISGQEL 155
            ||||:|..|:||...| .|....::||||.|.:|||||||:..:.|.||:..|.|||.|:.|...
plant   406 GESIWGKPFKDEPNSKLLHSGRGVVSMANSGPHTNGSQFFVLYKSATHLNYKHTVFGGVVGGLAT 470

  Fly   156 VRQLEGLPVDRNSRPLQDAAIANCG-------ELVRQTKAKKEKKHKRRSTATE---------DS 204
            :..:|.:|||.:.|||::..|....       ||..:.:.:|.:|.|......|         .|
plant   471 LAAMENVPVDESDRPLEEIKIIEASVFVNPYTELDEEEEKEKAEKEKNEDKDIEKIGSWYSNPGS 535

  Fly   205 NSEESEAEAKVVRKAKKKKRS--RKDTKSQSDSE 236
            .:.|:.|....|.|..|...|  .||||...||:
plant   536 GTTEAGAGGGGVGKYLKAMSSTATKDTKGSLDSD 569

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Moca-cypNP_733246.1 cyclophilin 13..180 CDD:469651 66/153 (43%)
PRK12678 612..>804 CDD:237171
PUB49NP_201554.1 RING-Ubox_PPIL2 38..110 CDD:438325
RING_Ubox 101..159 CDD:473075
cyclophilin_RING 345..502 CDD:238904 66/160 (41%)
Blue background indicates that the domain is not in the aligned region.

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