DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Moca-cyp and Ppih

DIOPT Version :9

Sequence 1:NP_733246.1 Gene:Moca-cyp / 43374 FlyBaseID:FBgn0039581 Length:970 Species:Drosophila melanogaster
Sequence 2:XP_003750067.2 Gene:Ppih / 366461 RGDID:1564921 Length:177 Species:Rattus norvegicus


Alignment Length:178 Identity:90/178 - (50%)
Similarity:115/178 - (64%) Gaps:7/178 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 DAGATRPRCFFDISLGGLGMGRIVFELFNDVAPKTAENFRALCTGE--KGFGLITGKKLQYKGVI 69
            ::....|..|||:|:||..:||:..|||.||.||||||||..||||  |     .|..:.|||..
  Rat     5 NSSPVNPVVFFDVSIGGQEVGRMKIELFADVVPKTAENFRQFCTGEFRK-----DGVPIGYKGST 64

  Fly    70 FHRVVKDFMVQAGDFSAGNGTGGESIYGGTFEDESFEKKHDRPFLLSMANRGKNTNGSQFFITTQ 134
            ||||:||||:|.|||..|:|||..|||.|.|.||:|:.:|..|.||||||.|.:|||.|||||..
  Rat    65 FHRVIKDFMIQGGDFVNGDGTGVASIYRGPFADENFKLRHSAPGLLSMANSGPSTNGCQFFITCS 129

  Fly   135 PAPHLDNIHVVFGQVISGQELVRQLEGLPVDRNSRPLQDAAIANCGEL 182
            ....||..|||||::|.|..::|::|.:|...|::|.....|:.|||:
  Rat   130 KCDWLDGKHVVFGKIIDGLLVMRKIENVPTGPNNKPKLPVVISQCGEM 177

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Moca-cypNP_733246.1 cyclophilin 13..180 CDD:294131 87/168 (52%)
SH3-RhoG_link 635..>718 CDD:293215
PpihXP_003750067.2 cyclophilin 8..177 CDD:412213 89/173 (51%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1403619at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.920

Return to query results.
Submit another query.