DRSC/TRiP Functional Genomics Resources

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Protein Alignment Moca-cyp and ppwd1

DIOPT Version :10

Sequence 1:NP_733246.1 Gene:Moca-cyp / 43374 FlyBaseID:FBgn0039581 Length:970 Species:Drosophila melanogaster
Sequence 2:XP_002934239.3 Gene:ppwd1 / 100488042 XenbaseID:XB-GENE-1001509 Length:640 Species:Xenopus tropicalis


Alignment Length:156 Identity:73/156 - (46%)
Similarity:93/156 - (59%) Gaps:16/156 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 MGRIVFELFNDVAPKTAENFRALCT-GEKGFGLITGKKLQYKGVIFHRVVKDFMVQAGDFSAGNG 89
            ||.|..:||....|||.|||   |. ...|:         |...:||||:|.||:|.|| ..|.|
 Frog   494 MGDIHVKLFPVECPKTVENF---CVHSRNGY---------YNRHMFHRVIKGFMIQTGD-PTGTG 545

  Fly    90 TGGESIYGGTFEDESFEK-KHDRPFLLSMANRGKNTNGSQFFITTQPAPHLDNIHVVFGQVISGQ 153
            .|||||:||.||||.... :||||:.|||||.|.:|||||||:|..|.|.|||.|.|||:|..|.
 Frog   546 MGGESIWGGEFEDEFHATLRHDRPYTLSMANAGPSTNGSQFFLTVVPTPWLDNKHTVFGRVTKGM 610

  Fly   154 ELVRQLEGLPVD-RNSRPLQDAAIAN 178
            |:|:::....|: :..:|.:|.:|.|
 Frog   611 EVVQRICNSKVNPKTDKPYEDISIIN 636

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Moca-cypNP_733246.1 cyclophilin 13..180 CDD:469651 73/156 (47%)
PRK12678 612..>804 CDD:237171
ppwd1XP_002934239.3 WD40 83..312 CDD:475233
WD40 repeat 88..125 CDD:293791
WD40 repeat 131..169 CDD:293791
WD40 repeat 177..213 CDD:293791
WD40 repeat 221..266 CDD:293791
cyclophilin_WD40 489..637 CDD:238908 73/156 (47%)
Blue background indicates that the domain is not in the aligned region.

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