DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Gfat2 and GFAT

DIOPT Version :10

Sequence 1:NP_651617.1 Gene:Gfat2 / 43373 FlyBaseID:FBgn0039580 Length:683 Species:Drosophila melanogaster
Sequence 2:NP_189051.3 Gene:GFAT / 821995 AraportID:AT3G24090 Length:677 Species:Arabidopsis thaliana


Alignment Length:704 Identity:344/704 - (48%)
Similarity:476/704 - (67%) Gaps:48/704 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MCGIFAYLNYLTPKSRQEVLDLLLQGLKRLEYRGYDSTGIAIDALNSGEAQSIMLVKRTGKVKVL 65
            |||||||||:...|.|:.:||:|..||:|||||||||.|||||  ||..:.|.::.::.|.::.|
plant     1 MCGIFAYLNFHANKERRYILDVLFNGLRRLEYRGYDSAGIAID--NSSPSSSPLVFRQAGNIESL 63

  Fly    66 EDAVAEVCRGQDYSLP--IDTHIGIAHTRWATHGVPSEVNSHPQRSDEDNSFVVVHNGIITNYKD 128
            .::|.|.....|.:|.  ...|.|||||||||||.|:..|||||.|...:.|:|||||:||||:.
plant    64 VNSVNEEITNTDLNLDEVFYFHAGIAHTRWATHGEPAPRNSHPQSSGPGDDFLVVHNGVITNYEV 128

  Fly   129 VKTLLEKRGYVFESDTDTEVIAKLVHHLW---QQHPG--YTFGELVEQAIQQLEGAFAIAFKSKH 188
            :|..|.:.|:.||||||||||.||...::   .:..|  .||.|:|.:.::.||||:|:.|||.|
plant   129 LKETLVRHGFTFESDTDTEVIPKLAKFVFDKANEEGGQTVTFCEVVFEVMRHLEGAYALIFKSWH 193

  Fly   189 FPGECVASRRGSPLLVGIKAKTKLATDHIPILYAKAHRPHGQPQQQAYQLLPPGDCNAEFQPLER 253
            :|.|.:|.:.|||||:|:|                 ....|:.....:|       :|.|.....
plant   194 YPNELIACKLGSPLLLGVK-----------------ELDQGESNSHVFQ-------DAHFLSKND 234

  Fly   254 KEVEYFFASDASAVIEHTNRVIYLEDDDVAAVKSDGTLSIHRLNK--------SSDDPHAREIIT 310
            ...|:|.:||..|::|||.:|:.:||.:|..:| ||.:||.:...        |......|.:..
plant   235 HPKEFFLSSDPHALVEHTKKVLVIEDGEVVNLK-DGGVSILKFENERGRCNGLSRPASVERALSV 298

  Fly   311 LKMEIQQIMKGNYDYFMLKEIFEQPESVVNTMRGRM----RFDTQTVVLGGIKEYIPEIKRCRRL 371
            |:||::||.||.||::|.|||.|||||:..|||||:    ...|:||:|||:|:::..|:|.||:
plant   299 LEMEVEQISKGKYDHYMQKEIHEQPESLTTTMRGRLIRGGSRKTKTVLLGGLKDHLKTIRRSRRI 363

  Fly   372 MLIACGTSYHSAVATRQLLEELTELPVMVELASDFLDRNTPIFRDDVCFFISQSGETADTLMALR 436
            :.|.|||||::|:|:|.:||||:.:||.:|:|||..||..||:|:|...|:||||||||||:||.
plant   364 VFIGCGTSYNAALASRPILEELSGIPVSMEIASDLWDRQGPIYREDTAVFVSQSGETADTLLALD 428

  Fly   437 YCKQRGALIVGVTNTVGSSICRESHCGVHINAGPEIGVASTKAYTSQFISLVMFALVMSEDRLSL 501
            |.::.|||.||:||||||||.|::|||||||||.|||||||||||||.:.:||.||.:..|.:|.
plant   429 YARENGALCVGITNTVGSSIARKTHCGVHINAGAEIGVASTKAYTSQIVVMVMLALAIGSDTISS 493

  Fly   502 QQRRLEIIDGLSQLDEHIRTVLKLNSQVQQLAKELYEHKSLLIMGRGFNFATCLEGALKVKELTY 566
            |:||..|||||..|...::.||||:.:::.||:.|.:.:|||:.|||:|:||.|||||||||:..
plant   494 QKRREAIIDGLLDLPYKVKEVLKLDDEMKDLAQLLIDEQSLLVFGRGYNYATALEGALKVKEVAL 558

  Fly   567 MHSEGILAGELKHGPLALVDKEMPVLMIVLRDPVYTKCMNALQQVTSRKGRPILICEEGDNETMS 631
            ||||||||||:|||||||||:.:|:.:|..||..::|..:.:||:.:||||.|::|.:||..::|
plant   559 MHSEGILAGEMKHGPLALVDENLPIAVIATRDACFSKQQSVIQQLHARKGRLIVMCSKGDAASVS 623

  Fly   632 F--STRSLQIPRTVDCLQGVLTVIPLQLLSYHIAVLRGCDVDCPRNLAKSVTVE 683
            .  |.|::::|:..||||.|:.::|||||:||:.||||.:||.|||||||||.:
plant   624 SSGSCRAIEVPQVEDCLQPVINIVPLQLLAYHLTVLRGHNVDQPRNLAKSVTTQ 677

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gfat2NP_651617.1 PLN02981 1..683 CDD:215531 344/702 (49%)
GFATNP_189051.3 PLN02981 1..677 CDD:215531 344/702 (49%)

Return to query results.
Submit another query.