DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gfat2 and Gfpt2

DIOPT Version :9

Sequence 1:NP_651617.1 Gene:Gfat2 / 43373 FlyBaseID:FBgn0039580 Length:683 Species:Drosophila melanogaster
Sequence 2:NP_001002819.2 Gene:Gfpt2 / 360518 RGDID:1303097 Length:682 Species:Rattus norvegicus


Alignment Length:696 Identity:454/696 - (65%)
Similarity:563/696 - (80%) Gaps:27/696 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MCGIFAYLNYLTPKSRQEVLDLLLQGLKRLEYRGYDSTGIAIDALNSGEAQS--IMLVKRTGKVK 63
            |||||||:||..||:|:|:.:.|::||:|||||||||.|:|||. |:.|.:.  |.|||:.||||
  Rat     1 MCGIFAYMNYRVPKTRKEIFETLIRGLQRLEYRGYDSAGVAIDG-NNHEVKERHIHLVKKKGKVK 64

  Fly    64 VLEDAVAEVCRGQDYSLPIDTHIGIAHTRWATHGVPSEVNSHPQRSDEDNSFVVVHNGIITNYKD 128
            .|::.:.:. ...|..:..:||.|||||||||||||:.|||||||||:||.|||:||||||||||
  Rat    65 ALDEELYKQ-DSMDLKVEFETHFGIAHTRWATHGVPNVVNSHPQRSDKDNEFVVIHNGIITNYKD 128

  Fly   129 VKTLLEKRGYVFESDTDTEVIAKLVHHLW--QQHPGYTFGELVEQAIQQLEGAFAIAFKSKHFPG 191
            ::..||.:||.|||:||||.||||:.:::  ::....||..|||:.|||||||||:.|||.|:||
  Rat   129 LRKFLESKGYEFESETDTETIAKLIKYVFDNRETEDITFSTLVERVIQQLEGAFALVFKSIHYPG 193

  Fly   192 ECVASRRGSPLLVGIKAKTKLATDHIPILYAKAHRPHGQPQQQAYQLLPPGDCNAEFQPLER--- 253
            |.||:|||||||:|:::|.||:|:.||:||......:.:           ..|....:.|:.   
  Rat   194 EAVATRRGSPLLIGVRSKYKLSTEQIPVLYRTCTIENVK-----------NICKTRLKRLDSSTC 247

  Fly   254 ------KEVEYFFASDASAVIEHTNRVIYLEDDDVAAVKSDGTLSIHRLNKSSDDPHAREIITLK 312
                  |.||:||||||||:||||||||:|||||:||| :||.|||||:.:|:.|..:|.|.||:
  Rat   248 LHAVGDKAVEFFFASDASAIIEHTNRVIFLEDDDIAAV-ADGKLSIHRVKRSASDDPSRAIQTLQ 311

  Fly   313 MEIQQIMKGNYDYFMLKEIFEQPESVVNTMRGRMRFDTQTVVLGGIKEYIPEIKRCRRLMLIACG 377
            ||:|||||||:..||.||||||||||.||||||:.|:|.||:|||:|:::.||:|||||::|.||
  Rat   312 MELQQIMKGNFSAFMQKEIFEQPESVFNTMRGRVNFETNTVLLGGLKDHLKEIRRCRRLIVIGCG 376

  Fly   378 TSYHSAVATRQLLEELTELPVMVELASDFLDRNTPIFRDDVCFFISQSGETADTLMALRYCKQRG 442
            ||||:||||||:|||||||||||||||||||||||:|||||||||||||||||||:||||||.||
  Rat   377 TSYHAAVATRQVLEELTELPVMVELASDFLDRNTPVFRDDVCFFISQSGETADTLLALRYCKDRG 441

  Fly   443 ALIVGVTNTVGSSICRESHCGVHINAGPEIGVASTKAYTSQFISLVMFALVMSEDRLSLQQRRLE 507
            ||.||:||||||||.||:.|||||||||||||||||||||||||||||.|:|||||:|||.||.|
  Rat   442 ALTVGITNTVGSSISRETDCGVHINAGPEIGVASTKAYTSQFISLVMFGLMMSEDRISLQTRRQE 506

  Fly   508 IIDGLSQLDEHIRTVLKLNSQVQQLAKELYEHKSLLIMGRGFNFATCLEGALKVKELTYMHSEGI 572
            ||.||..|.|.|:.||.|:.::..||.|||..:|||:||||:|:|||||||||:||:||||||||
  Rat   507 IIRGLRSLPELIKEVLSLDEKIHDLALELYTQRSLLVMGRGYNYATCLEGALKIKEITYMHSEGI 571

  Fly   573 LAGELKHGPLALVDKEMPVLMIVLRDPVYTKCMNALQQVTSRKGRPILICEEGDNETMSFSTRSL 637
            |||||||||||||||:|||:|::::||.:.||.|||||||:|:||||::|.:.|.|:..|:.:::
  Rat   572 LAGELKHGPLALVDKQMPVIMVIMKDPCFAKCQNALQQVTARQGRPIILCSKDDTESSKFAYKTI 636

  Fly   638 QIPRTVDCLQGVLTVIPLQLLSYHIAVLRGCDVDCPRNLAKSVTVE 683
            ::|.|||||||:|:||||||||:|:|||||.|||.|||||||||||
  Rat   637 ELPHTVDCLQGILSVIPLQLLSFHLAVLRGYDVDFPRNLAKSVTVE 682

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity
Gfat2NP_651617.1 PLN02981 1..683 CDD:215531 452/694 (65%)
GFAT 2..285 CDD:238366 160/295 (54%)
SIS_GlmS_GlmD_1 370..495 CDD:240141 109/124 (88%)
SIS_GlmS_GlmD_2 528..681 CDD:240142 104/152 (68%)
Gfpt2NP_001002819.2 PLN02981 1..682 CDD:215531 452/694 (65%)
GFAT 2..285 CDD:238366 160/295 (54%)
SIS_GlmS_GlmD_1 369..494 CDD:240141 109/124 (88%)